Parental gene:

TIPIN, ENSPTRG00000007192

Aliases:None
Description:TIMELESS interacting protein [Source:HGNC Symbol;Acc:30750]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:63811434..63831389(-)


>ENSPTRG00000007192
ATGCTAGAACCACAGGAGAATGGCATGATTGACCTACCAGATTATGAGCATGTAGAAGATGAAACTTTTCCTCCTTTCCC
ACCTCCAGCCTCTCCAGAGAGACAAGATGGTGAAGGAACTGAGCCTGATGAAGAGTCAGGAAATGCAGCACCTGTTCCTG
TACCTCCAAAGAGAACAGTTAAAAGAAATATACCCAAGCTGGATGCTCAGAGATTAATTTCAGAGAGAGGACTTCCAGCC
TTAAGGCATGTATTTGATAAGGCAAAATTCAAAGGTAAAGGTCATGAGGCTGAAGACTTGAAGATGCTAATCAGACACAT
GGAGCACTGGGCACATAGGCTATTCCCTAAACTGCAGTTTGAGGATTTTATTGACAGAGTTGAATACCTGGGAAGTAAAA
AGGAAGTTCAGACCTTAAAACGAATTCGACTTGATCCTCCTATTTTACATGAAGATTTTGTTAGCAATAATGATGAAGTT
GCGGAGAATAATGAACATGATGTCACTTCTACTGAATTAGATCCCTTTCTGACAAACTTATCTGAAAGTGAGATGTTTGC
TTCTGAGTTAAGTAGAAGCCTAACAGAAGAGCAACAACAAAGAATTGAGAGAAATAAACAACTGGCCTTGGAAAGAAGGC
AGGCAAAGCTGCTGAGTAATAGTCAGACCCTAGGAAATGATATGTTAATGAATACACCTAGGGCACACACGGTTGAAGAG
GTTAATACTGATGAGGATCAAAAGGAGGAGTCAAATGGATTAAACGAAGACATTCTGGACAATCCATGTAATGATGCTAT
TGCCAATACTTTAAATGAAGAGGAAACACTGCTGGACCAGTCTTTTAAAAATGTGCAACAGCAACTTGATGCTACATCCA
GAAATATTACTGAAGCTAGATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .29 RPM
SRP007412_cerebellum 2 .08 RPM
SRP007412_heart 0 .76 RPM
SRP007412_kidney 1 .39 RPM
SRP007412_liver 1 .44 RPM
SRP007412_testis 14 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004860 ortholog_one2one 1 retrogene
retro_chof_223,
Dasypus novemcinctus ENSDNOG00000003177 ortholog_one2one 3 retrogenes
retro_dnov_1334, retro_dnov_1481, retro_dnov_410,
Homo sapiens ENSG00000075131 ortholog_one2one 1 retrogene
retro_hsap_4837,
Gorilla gorilla ENSGGOG00000000061 ortholog_one2one 3 retrogenes
retro_ggor_1268, retro_ggor_2907, retro_ggor_3016,
Loxodonta africana ENSLAFG00000026016 ortholog_one2one 1 retrogene
retro_lafr_1104,
Microcebus murinus ENSMICG00000004386 ortholog_one2one 2 retrogenes
retro_mmur_155, retro_mmur_255,
Macaca mulatta ENSMMUG00000003695 ortholog_one2one 1 retrogene
retro_mmul_1582,
Nomascus leucogenys ENSNLEG00000012909 ortholog_one2one 1 retrogene
retro_nleu_1336,
Rattus norvegicus ENSRNOG00000043068 ortholog_one2many 1 retrogene
retro_rnor_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1145 86.55 73.67
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2. retro_ptro_3220 84.75 58.67
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Download FASTA sequences of all ENSPTRG00000007192 retrocopies