Parental gene:

NDUFA9, ENSPTRG00000004557

Aliases:None
Description:Pan troglodytes NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa (NDUFA9), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001079914]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:4758977..4797654(+)


>ENSPTRG00000004557
ATGGCGGCTGCAGCACAATCCCGGGTTGTCCGGGTCCTGTCAATGTCACGTTCTGCCATTACTGCAATAGCCACATCTGT
GTGTCACGGCCCACCCTGTCGCCAGCTTCATCATGCCCTCATGCCTCATGGGAAAGGTGGACGTTCCTCAGTCAGTGGGA
TTGTGGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATGTTGTCAACCACCTTGGACGCATGGGGTCACAGGTA
ATCATACCCTATCGGTGTGATAAATACGACATCATGCACCTTCGTCCCATGGGTGACCTGGGCCAGCTTCTGTTTCTGGA
ATGGGACGCGAGAGATAAAGATTCTATCCGACAAGTAGTACAACACAGCAATGTGGTCATCAATCTTATTGGACGAGACT
GGGAAACCAAAAACTATGATTTTGAGGATGTTTTTGTGAAGATTCCCCAAGCAATTGCTCAACTGTCCAAGGAAGCTGGA
GTTGAAAAATTCATTCATGTTTCACATCTGAATGCGAATATTAAAAGCTCTTCTAGATATTTGAGAAATAAGGCTGTTGG
AGAGAAAGTAGTGAGAGATGCATTTCCAGAAGCCATTATCATAAAGCCGTCGGACATCTTTGGAAGAGAGGATAGATTCC
TTAATTCTTTTGCAAGTATGCATCGATTTGGTCCTATACCCCTTGGTTCCTTGGGCTGGAAGACAGTTAAACAACCAGTA
TATGTCGTAGATGTATCCAAAGGAATTGTTAATGCAGTTAAGGATCCTGATGCCAACGGGAAATCCTTTGCTTTCGTTGG
TCCCAGTCGGTACCTCCTTTTCCACCTGGTGAAGTACATCTTTGCTGTGGCTCACAGATTGTTCCTCCCATTCCCCTTGC
CACTTTTTGCCTATCGATGGGTAGCAAGAGTCTTTGAAATAAGCCCATTTGAGCCCTGGATAACAAGGGATAAAGTGGAG
CGGATGCACATCACAGACATGAAATTGCCTCACCTGCCTGGCTTAGAAGACCTTGGTATTCAGGCAACACCACTGGAACT
CAAGGCCATTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCTGCTGAAATTGAGGATGTGAAGCCGGCCAAGA
CCGTCAACATTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 51 .67 RPM
SRP007412_cerebellum 41 .41 RPM
SRP007412_heart 139 .49 RPM
SRP007412_kidney 94 .38 RPM
SRP007412_liver 50 .61 RPM
SRP007412_testis 24 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000009588 ortholog_one2many 1 retrogene
retro_acar_16,
Danio rerio ENSDARG00000070723 ortholog_one2many 1 retrogene
retro_drer_1,
Homo sapiens ENSG00000139180 ortholog_one2many 1 retrogene
retro_hsap_2585,
Gorilla gorilla ENSGGOG00000006076 ortholog_one2one 1 retrogene
retro_ggor_1618,
Macaca mulatta ENSMMUG00000020813 ortholog_one2one 1 retrogene
retro_mmul_648,
Monodelphis domestica ENSMODG00000018283 ortholog_one2many 1 retrogene
retro_mdom_209,
Nomascus leucogenys ENSNLEG00000003252 ortholog_one2one 1 retrogene
retro_nleu_1520,
Otolemur garnettii ENSOGAG00000005225 ortholog_one2one 1 retrogene
retro_ogar_2244,
Pongo abelii ENSPPYG00000004171 ortholog_one2one 1 retrogene
retro_pabe_1905,
Ictidomys tridecemlineatus ENSSTOG00000006504 ortholog_one2one 1 retrogene
retro_itri_543,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1511 81.94 100.00
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Download FASTA sequences of all ENSPTRG00000004557 retrocopies