Parental gene:

CCDC86, ENSPTRG00000003721

Aliases:None
Description:Pan troglodytes coiled-coil domain containing 86 (CCDC86), mRNA. [Source:RefSeq mRNA;Acc:NM_001246553]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:58670405..58679534(+)


>ENSPTRG00000003721
ATGGATACACCGTTAAGGCGCAGCCGACGGCTGGGAGGCCTAAGGCCCGAATCCCCCGAGAGCCTCACCTCAGTTTCGCG
GACGAGACGGGCCCTTGTGGAGTTCGAGTCGAACCCAGAAGAAACGAGGGAGCCCGGGTCTCCTCCGAGTGTGCAGCGGG
CTGGCCTGGGGTCCCCCGAAAGGCCGCCGAAGACAAGCCCAGGATCACCCCGTCTGCAGCAGGATGCAGGCTTGGAGTCC
CCCCAAGGGCAGCCAGAGCCAGGCGCAGCGTCCCCCCAGCGTCAGCAAGACCTACACCTGGAGTCGCCTCAAAGACAGCC
GGAGTACAGTCCTGAATCCCCACGATGTCAGCCGAAGCCAAGTGAGGAGGCACCAAAGTGTTCTCAGGACCAGGGAGTAC
TGGCCTCGGAGTTGGCCCAGAGTAAGGAGGAGCTGACCCCGGGGGCCCCCCAGCATCAGCTACCGCCGGTCCCGGGATCA
CCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAGCCCTCTCAGCCACTACTGGAGCTGACACCCAGGGCACCTGG
CTCCCCCCGGGGTCAGCATGAGCCGAGCAAACCACCTCCAGCTGGGGAGACGGTGACAGGCGGCTTCGGGGCAAAGAAGC
GAAAAGGTTCTTCATCCCAGGCCCTAGCGTCCAAGACGTTGAATAAAGAGGAGCTTCCTGTAATCCCAAAGGGGAAGCCC
AAATCGGGACGAGTGTGGAAGGACCGCTCCAAGAAAAGATTCTCCCAGATGCTTCAGGACAAGCCCCTGCGCACATCGTG
GCAGCGGAAGATGAAGGAACGGCAGGAGAGGAAGCTGGCCAAGGACTTTGCCCGTCACCTGGAGGAGGAGAAGGAGAGGC
GCCGCCAGGAGAAGAAACAGCGCCGGGCTGAGAACCTGAAACGCCGCCTGGAGAATGAGCGGAAGGCAGAGGTCGTCCAA
GTGATCCGAAACCCCGCCAAGCTCAAGCGGGCAAAGAAGAAGCAGCTGCGCTCCATTGAGAAGCGGGACACCCTGGCCCT
GCTGCAGAAGCAGCCGCCCCAGCAGCCGGCAGCCAAGATCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .03 RPM
SRP007412_cerebellum 11 .69 RPM
SRP007412_heart 5 .48 RPM
SRP007412_kidney 9 .07 RPM
SRP007412_liver 10 .05 RPM
SRP007412_testis 57 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000110104 ortholog_one2one 2 retrogenes
retro_hsap_3276, retro_hsap_3834,
Gorilla gorilla ENSGGOG00000013670 ortholog_one2one 1 retrogene
retro_ggor_2582,
Macaca mulatta ENSMMUG00000000019 ortholog_one2one 1 retrogene
retro_mmul_1622,
Nomascus leucogenys ENSNLEG00000013582 ortholog_one2one 1 retrogene
retro_nleu_2131,
Pongo abelii ENSPPYG00000003205 ortholog_one2one 1 retrogene
retro_pabe_2818,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2216 64.31 72.78
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2. retro_ptro_2610 76.36 100.00
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Download FASTA sequences of all ENSPTRG00000003721 retrocopies