Parental gene: | FAM149B1, ENSPTRG00000002623 |
| Aliases: | None |
| Description: | family with sequence similarity 149, member B1 [Source:HGNC Symbol;Acc:29162] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:71756543..71832247(+) |
>ENSPTRG00000002623
ATGATCTCCAGATACACTCGGAAGGCGGTGCCACAGAGCTTGGAGCTGAAAGGAATAACAAAACATGCTCTTAACCATCA
TCCCCCTCCAGAGAAGCTGGAGGAAATTTCCCCCACCAGTGACAGTCATGAGAAAGACACAAGTTCCCAAAGCAAGTCTG
ACATCACAAGAGAATCATCTTTTACATCAGCCGACACTGGGAATTCACTGTCTGCTTTTCCAAGTTATACAGGCGCAGGG
ATATCTACTGAAGGAAGCTCGGACTTCTCCTGGGGATATGGTGAACTCGATCAAAATGCCACTGAAAAAGTCCAGGCAAT
GTTCACAGCCATTGATGAACTCTTGTATGAGCAGAAGTTGAGTGTGCATACCAAGAGTCTACAAGAAGAGTGCCAACAGT
GGACAGCTAGCTTTCCTCACCTCAGGATTCTAGGTAGGCAGATAATCACTCCAAGTGAAGGTTATAGATTGTATCCTAGA
TCCCCTTCTGCTGTTTCCGCTTCATATGAAACAACCTTGTCTCAAGAAAGAGATTCTACTATATTTGGTATAAGGGGAAA
GAAGTTACATTTTTCATCTTCTTATGCTCATAAAGCATCTTCCATTGCCAAATCCTCCAGCTTTTGTTCTATGGAAAGAG
ACGAGGAAGACTCTATAATCATCTCAGAAGGAATAATTGAGGAATACCTAGCATTCGATCACATAGATATAGAAGAGGGA
TTTCATGGGAAGAAATCAGAAGCAGCTACAGAGAAACAGAAATTAGGGTATCCTCCCATTGCTCCATTTTACTGCATGAA
AGAAGATGTCCTTGCTTATGTGTTTGACAATGTATGGTGCAAGGTTGTGAGCTGTATGGAGCAGTTGACACGTAGTCACT
GGGAAGGATTTGCCTCTGATGATGAGAGTAATGTTGCAGTTACCAGACCCGATTCAGAAAGTTCCTGTGTGCTGAGTGAA
CCACATCCTTTGGTGTTACCGCGAGTGCCACAGTCTAAGGTGCTGTCCATTACCTCAAATCCGATGAGTCTCTGTCAAGC
AAGCAGACATCAGCCAAATGTGAATGATCTCTTGGTTCATGGAATGCCTCTACAGCCAAGAAATCTCTCCCTAATGGACA
AGCTCCTAGATCTTGATGACAAGCTACTTATGAGGCCTGGGTCCAGTACCATCCTTTCAACTCGAAATTGGCCAAATCGA
GCTGTGGAGTTTAGTACATCATCTCTGTCATACACAGTGCAGTCCACCAGGAGACGCAATCCACCACCACGAACTCTTCA
TCCGATCAGCACGAGCCATTCATGTGCTGAAACACCAAGATCTGTGGAAGAAATCCTCAGAGGAGCCCGAGTCCCAGTGG
CACCCAACTCGCTCTCCTCTCCCTCACCGATGCCCCTGAGTCGAAATAATCTGCTACCACCTATTGGCACAGCTGAAGTG
GAACATGTGAGCACTGTGGGGCCACAAAGACAGATGAAACCCCATGGCGACTCTAGTCGAGCTCAAAGTGCGGTGGTGGA
TGAACCTAACTATCAGCAGCCACAAGAAAGGCTCCTTTTGCCTGACTTTTTCCCCAGGCCCAACACAACTCAATCATTTT
TGCTGGATACACAGTATCGTCGCTCATGTGCAGTTGAGTATCCTCATCAGGCCCGACCTGGCAGGGGATCTGCAGGTCCT
CAGTTACATGGGTCTACAAAATCTCAAAGCAGAGGCAGACCAGTCTCTCGAACCAGGCAGGGACCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .73 RPM |
| SRP007412_cerebellum | 14 .23 RPM |
| SRP007412_heart | 11 .31 RPM |
| SRP007412_kidney | 33 .08 RPM |
| SRP007412_liver | 10 .15 RPM |
| SRP007412_testis | 52 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000138286 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011281 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016575 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006554 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002142 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1036 | 88.66 | 91.75 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_ptro_2950 | 87.03 | 72.16 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002623 retrocopies