Parental gene:

ACTR3B, ENSPPYG00000018206

Aliases:None
Description:ARP3 actin-related protein 3 homolog B (yeast) [Source:HGNC Symbol;Acc:17256]
Organism:Orangutan (Pongo abelii)
Coordinates:7:150541289..150643740(+)


>ENSPPYG00000018206
ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCC
CCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCCCAAAGGAGAGTGTTGAGGG
GAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACGTATGCTACAAAGTGGCCGATACGACAT
GGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTGAACCTGAGGA
CCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCAT
TTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAA
CGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGG
AAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGG
GAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAG
GAATTTGCCAAGTATGATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTT
TGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGG
AGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGTCCGCTGTATAAGAATGTCGTA
CTCTCGGGAGGCTCCACCATGTTCAGGGATTTTGGACGCCGACTACAGAGGGATTTGAAGAGAGTGGTGGACGCTAGGCT
GAGGCTCAGCGAGGAACTCAGCGGTGGGAGGATCAAGCCAAAGCCTGTGGAGGTCCAGGTGGTCACACATCACATGCAGC
GCTACGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCAACTCCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACTAC
GAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTCGGAGTCATGTCCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 78 .02 RPM
SRP007412_cerebellum 28 .58 RPM
SRP007412_heart 9 .90 RPM
SRP007412_kidney 11 .30 RPM
SRP007412_liver 8 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007730 ortholog_one2many 5 retrogenes
retro_chof_1134, retro_chof_1204, retro_chof_1899, retro_chof_208, retro_chof_2171,
Dasypus novemcinctus ENSDNOG00000019288 ortholog_one2one 2 retrogenes
retro_dnov_1143, retro_dnov_2539,
Homo sapiens ENSG00000133627 ortholog_one2one 7 retrogenes
retro_hsap_1676, retro_hsap_2126, retro_hsap_2540, retro_hsap_2966, retro_hsap_4334, retro_hsap_4921, retro_hsap_561,
Macropus eugenii ENSMEUG00000004885 ortholog_one2one 5 retrogenes
retro_meug_1340, retro_meug_1477, retro_meug_2105, retro_meug_330, retro_meug_899,
Nomascus leucogenys ENSNLEG00000015688 ortholog_one2one 1 retrogene
retro_nleu_733,
Pongo abelii ENSPPYG00000012798 within_species_paralog 1 retrogene
retro_pabe_3647,
Pan troglodytes ENSPTRG00000019897 ortholog_one2one 8 retrogenes
retro_ptro_1137, retro_ptro_1479, retro_ptro_2007, retro_ptro_2952, retro_ptro_2961, retro_ptro_3052, retro_ptro_3281, retro_ptro_420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2460 75.91 77.75
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Download FASTA sequences of all ENSPPYG00000018206 retrocopies