Parental gene:

UFD1L, ENSPPYG00000011580

Aliases:None
Description:ubiquitin fusion degradation 1 like (yeast) [Source:HGNC Symbol;Acc:12520]
Organism:Orangutan (Pongo abelii)
Coordinates:22:15374218..15403790(-)


>ENSPPYG00000011580
ATGTTCTCTTTCAACATGTTCGACCACCCGATTCCCAGGGTCTTCCAAAACCGCTTCTCCACACAGTACCGCTGCTTCTC
TGTGTCCATGCTAGCAGGGCCTAATGACAGGTCAGATGTGGAGAAAGGAGGGAAGATAATTATGCCGCCCTCAGCCCTAG
ACCAACTCAGCCGACTTAACATTACCTATCCCATGCTGTTCAAACTGACCAATAAGAATTCGGACCGCATGACGCATTGT
GGCGTGCTGGAGTTTGTGGCTGATGAGGGCATCTGCTACCTCCCACACTGGATGATGCAGAACTTACTCTTGGAAGAAGG
CGGCCTGGTCCAGGTGGAGAGTGTCAACCTTCAAGTGGCCACCTACTCCAAATTCCAACCTCAGAGCCCTGACTTCCTGG
ACATCACCAACCCCAAAGCCGTATTAGAAAACGCACTTAGGAACTTTGCCTGTCTGACCACCGGGGATGTGATTGCCATC
AACTATAATGAAAAGATCTACGAACTGCGTGTGATGGAGACCAAACCCGACAAGGCAGTGTCCATCATTGAGTGTGACAT
GAACGTGGACTTTGATGCTCCCCTGGGCTACAAAGAACCCGAAAGACAAGTCCAGCATGAGGAGTCGACAGAAGGTGAAG
CCGACCACAGTGGCTATGCTGGAGAGCTGGGCTTCCGCGCTTTCTCTGGATCTGGCAATAGACTGGATGGAAAGAAGAAA
GGGGTAGAGCCCAGCCCCTCCCCAATCAAGCCTGGAGATATTAAAAGAGGAATTCCCAATTATGAATTTAAACTTGGTAA
GATAACTTTCATCAGAAATTCACGTCCCCTTGTCAAAAAGGTTGAAGAGGATGAAGCTGGAGGCAGATTCGTCGCTTTCT
CTGGAGAAGGACAGTCGTTGCGTAAAAAGGGAAGAAAGCCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .44 RPM
SRP007412_cerebellum 21 .04 RPM
SRP007412_heart 10 .17 RPM
SRP007412_kidney 19 .59 RPM
SRP007412_liver 23 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000004294 ortholog_one2one 1 retrogene
retro_fcat_604,
Homo sapiens ENSG00000070010 ortholog_one2one 1 retrogene
retro_hsap_1929,
Gorilla gorilla ENSGGOG00000004104 ortholog_one2many 1 retrogene
retro_ggor_175,
Myotis lucifugus ENSMLUG00000002466 ortholog_one2many 1 retrogene
retro_mluc_1244,
Macaca mulatta ENSMMUG00000031106 ortholog_one2one 1 retrogene
retro_mmul_1347,
Pteropus vampyrus ENSPVAG00000006417 ortholog_one2one 1 retrogene
retro_pvam_1349,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1593 91.26 100.00
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Download FASTA sequences of all ENSPPYG00000011580 retrocopies