Parental gene:

CHMP4A, ENSPPYG00000005691

Aliases:None
Description:charged multivesicular body protein 4A [Source:HGNC Symbol;Acc:20274]
Organism:Orangutan (Pongo abelii)
Coordinates:14:23688104..23691927(-)


>ENSPPYG00000005691
GGATTGGGCAAGGCTGGTCCCTGTGTGATGAGACATCACCCTCCCAGGAGCAAGGCGGAAGTTCAGAGGACGCCGAGGGG
CGGAGGCGGGAGAGGCGAGCTCGCGATGAGTGGTCTCGGCAGGCTCTTCGGGAAGGGGAAGAAGGAGAAAGGGCCAACCC
CTGAAGAAGCAATACAGAAACTGAAGGAGACAGAGAAGATACTGATCAAGAAACAGGAATTTTTGGAGCAGAAGATTCAA
CAGGAGCTACAAACAGCCAAGAAGTATGGGACCAAGAATAAGAGAGCTGCCCTACAGGCTTTGCGGAGGAAGAAAAGATT
CGAACAGCAGCTGGCACAAACTGATGGGACATTATCCACCCTGGAGTTTCAGCGTGAGGCCATTGAGAATGCCACTACCA
ATGCAGAAGTCCTTCGTACCATGGAGCTTGCTGCCCAAAGCATGAAGAAGGCCTACCAGGACATGGACATTGACAAGGTA
GATGAACTGATGACTGACCATAACCAACAGGGAGATTGGCCCAGCCAGATCTCAGATGCCATTTCTCCGGCCTNATGGGC
NTTTGGAGATGATGTGGACCAGGATGAACTGCTGGAGGAGCTAGAGGAGCTGGAGCAGGAGGAATTGGCCCAGGAGTTGT
TAAATGTGGGCGACAAGGAGGAAGAACCCCCAGTCAAATTGCCTAGTGTACCTTCTGCTCATCTGCCGGCAGGGCCAGTC
CCAAAGCAGGATGAAGATGAAGAAGCACTAAAGCAGTTGGCTGAGTGGGTATCC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .76 RPM
SRP007412_cerebellum 12 .28 RPM
SRP007412_heart 6 .20 RPM
SRP007412_kidney 28 .24 RPM
SRP007412_liver 14 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000254505 ortholog_one2one 1 retrogene
retro_hsap_2284,
Gorilla gorilla ENSGGOG00000016091 ortholog_one2one 1 retrogene
retro_ggor_1697,
Microcebus murinus ENSMICG00000001732 ortholog_one2one 1 retrogene
retro_mmur_1101,
Macaca mulatta ENSMMUG00000012476 ortholog_one2one 2 retrogenes
retro_mmul_1035, retro_mmul_1694,
Pongo abelii ENSPPYG00000010931 within_species_paralog 1 retrogene
retro_pabe_1111,
Sorex araneus ENSSARG00000008328 ortholog_one2one 1 retrogene
retro_sara_530,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1937 62.07 66.28
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Download FASTA sequences of all ENSPPYG00000005691 retrocopies