Parental gene:

H3F3B, ENSOPRG00000015952

Aliases:None
Description:H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_4576:37..62646(+)


>ENSOPRG00000015952
ACGGTTCGTACAAAGCAGACTGCCCGCAAATCGACTGGGGGCAAAGCACCCAGAAAACAACTGGCTACAAAAGCCGCTCG
CAAAAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCACCGTTACAGGCTTGGTACTGTGGCGCTCCGTGAAATTAGAC
GTTATCAGAAGTCCACTGAGCTTCTGATTCGCAAACTCCCCTTCCAACGTCTGGTGCGAGAAATTGCTCAGGATTTCAAA
ACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTATCTGGTTGGCCTGTTTGAAGA
CACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAG
AACGTGCTTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009661 ortholog_one2one 10 retrogenes
retro_chof_1580, retro_chof_1635, retro_chof_1911, retro_chof_2281, retro_chof_2294, retro_chof_2343, retro_chof_2546, retro_chof_454, retro_chof_517, retro_chof_530,
Loxodonta africana ENSLAFG00000021624 ortholog_one2one 4 retrogenes
retro_lafr_172, retro_lafr_410, retro_lafr_546, retro_lafr_832,
Myotis lucifugus ENSMLUG00000015447 possible_ortholog 10 retrogenes
retro_mluc_146, retro_mluc_1571, retro_mluc_2286, retro_mluc_2344, retro_mluc_2364, retro_mluc_246, retro_mluc_2468, retro_mluc_2500, retro_mluc_392, retro_mluc_613,
Oryctolagus cuniculus ENSOCUG00000024644 possible_ortholog 2 retrogenes
retro_ocun_185, retro_ocun_217,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,
Ictidomys tridecemlineatus ENSSTOG00000024226 possible_ortholog 8 retrogenes
retro_itri_315, retro_itri_449, retro_itri_465, retro_itri_505, retro_itri_649, retro_itri_695, retro_itri_764, retro_itri_771,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_937 68.03 89.71
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2. retro_opri_1180 55.46 86.03
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Download FASTA sequences of all ENSOPRG00000015952 retrocopies