Parental gene:

SLC5A1, ENSOPRG00000010458

Aliases:None
Description:solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:HGNC Symbol;Acc:11036]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_720:96011..160569(+)


>ENSOPRG00000010458
ATGGACATTAGCACTTCGATCCCCCTGACCACCGCGGCGCCCCCAGAGCCCTACGAGCGCATCCGCAATGCCGCCGACAT
CTCCGTCATCGTCATCTACTTCTTGGTGGTGCTGGCTGTCGGGCTGTGGGCTATGCTTTCCACCAATCGTGGGACGGTTG
GAGGCTTCTTCCTGGCGGGTCGAAGTATGGTGTGGTGGCCGATTGGAGCCTCTCTCTTTGCCAGCAACATTGGAAGTGGC
CACTTTGTGGGACTGGCTGGGACAGGAGCCGCATCTGGTATTGCCACTGGAGGCTTTGAGTGGAATGCCCTGATTATGGT
GATTGTGCTGGGCTGGGTGTTTGTCCCCATTTACATCAAGGCCGGGGTGGTGACAATGCCGGAGTATCTGCAGAAGCGGT
TTGGAGGCAAGCGGATCCAGATCTACCTTTCCGTCCTGTCCCTGTTGATCTATATTTTTACCAAGATCTCGGCAGACATC
TTTTCCGGAGCTATCTTCATCCAACTGGCCTTGGGCCTGGATCTCTATGTAGCCATCATTGTGTTATTGGTTATCACTGG
AATCTTCACCATCACAGGTGGCTTGTCGGCTGTGATTTACACGGATGCCTTGCAAACGTTGATCATGCTGGTGGGGTCTT
GTATTCTGGTTGGATTTGCTTTTCATGAAGTGGGAGGATATGATGCCTTCACGGAAAAGTACATGCAAGCCATTCCCAGC
GTGACTTCTGAGGGAAACTTCTCCGCCTCCCAAGAATGCTACACCCCAAGGGAAGATGCCTTCCACATCTTCCGAGATGC
CATCACTGGAGACATCCCCTGGCCTGGGCTCGTCTTTGGAATGAGCATCCTCACCCTGTGGTACTGGTGTACCGATCAGG
TCATTGTGCAGCGTTGCCTCTCAGCCAAGAACATGTCTCATGTGAAGGCCGGCTGTATCATGTGTGGGTACCTGAAGATA
CTGCCCATGTTCCTCATCATCATGATGGGCATGATCAGTCGCATCCTGTACACAGATAGAATTGCCTGTGTCGTCCCGTC
GGAATGTGAGAGATACTGTGGCACCAGGGTTGGTTGTACAAACATCGCCTTCCCAATCTTGGTGGTGGAGCTCATGCCCA
ATGGGTTGCGAGGCCTGATGCTGTCGGTCATGATGGCTTCGCTCATCAGCTCCCTGACCTCCGTCTTCAACAGTGCCAGC
ACCCTCTTCACCATGGATCTCTACACCAAGATCAGGAACAAAGCAAGTGAGAGGGAGCTCATGATTGTGGGAAGGGTGTT
CATGCTGTTCCTGATTGCAGTCAGTATCGCCTGGGTGCCCATCGTGCAGTCAGCACAGAGCGGGCAGCTGTTCGATTACA
TCCAGTCCATCACCAGCTACCTGGGACCACCCATTGCAGCCCTCTTCCTGCTGGCTATTTTCTGGAAGAGAACTAATGAG
CCCGGAGCCTTTTGGGGACTGATCTTCGGATTCCTGGTGGGAATTTCTCGCATGATTGCCGAGTTTGCCTATGGAACTGG
GAGCTGTGTGGAGCCCAGCAACTGCCCCACGATTATTTGCGGTGTGCATTATTTATACTTTGCCATCATCCTCTTTGTCA
TTTCCATCATCGTCACTGTCGCTGTCTCCCTCTTCACCAAGCCCATCCCAGATGTGCATCTCCATCGTCTTTGCTGGAGC
CTGCGCAACAGCAAAGAGGAACGCATTGACTTGGATGCGAAAGAGGAGGAAATTCAAGAACCTCCACCTGAAGCCATGGA
AATAGATGCAGAAGGTCCTGAGAAGAAGAAAGGAATCTTCAGGCGGGCCTTTGATCTATTCTGTGGATTGGACCAGGGTA
AGGGACCCAAGCTGACCAAGGAAGAGGAGGAAGCCTTGAAGATGAAGATGACGGACACCTCTGAGGTGCCTTTGTGGAGG
ACTGTGGTGAACATCAATGGTGTCATCCTGCTCGCCGTGGCCGTCTTTTGCTACGCATACTTCGCCTGA

Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007944 ortholog_many2many 1 retrogene
retro_apla_5,
Choloepus hoffmanni ENSCHOG00000005940 ortholog_one2one 1 retrogene
retro_chof_2,
Callithrix jacchus ENSCJAG00000011369 ortholog_one2one 1 retrogene
retro_cjac_2033,
Ficedula albicollis ENSFALG00000007384 ortholog_one2many 1 retrogene
retro_falb_29,
Homo sapiens ENSG00000100170 ortholog_one2one 1 retrogene
retro_hsap_105,
Gallus gallus ENSGALG00000006728 ortholog_one2many 1 retrogene
retro_ggal_2,
Monodelphis domestica ENSMODG00000009915 ortholog_one2one 1 retrogene
retro_mdom_1324,
Mustela putorius furo ENSMPUG00000012749 ortholog_one2one 1 retrogene
retro_mputfur_837,
Oryctolagus cuniculus ENSOCUG00000017569 ortholog_one2one 1 retrogene
retro_ocun_1633,
Otolemur garnettii ENSOGAG00000003370 ortholog_one2one 1 retrogene
retro_ogar_2513,
Procavia capensis ENSPCAG00000015157 ortholog_one2one 1 retrogene
retro_pcap_3,
Rattus norvegicus ENSRNOG00000017775 ortholog_one2one 1 retrogene
retro_rnor_794,
Ictidomys tridecemlineatus ENSSTOG00000006386 ortholog_one2one 1 retrogene
retro_itri_13,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_6 54.14 79.76
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOPRG00000010458 retrocopies