Parental gene:

BLOC1S5, ENSOCUG00000025755

Aliases:None
Description:biogenesis of lysosomal organelles complex-1, subunit 5, muted [Source:HGNC Symbol;Acc:18561]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:1786114..1837467(-)


>ENSOCUG00000025755
ATGAGTGGCGGAGGGGAAGAGACCCCTGTGGGTTGTGAGGTCCCCACGGGCGGCGGCGGCAAGAAGCGGGACTCGCTGGG
GACCGCGGGCTCAGCGCATCTCATTATCAAGGATCTCGGAGAAATTCATTCGAGACTTTTGGATCACAGACCGGTTATTC
AAGGAGAAACTCGTTATTTTGTAAAAGAATTTGAAGAAAAACGCGGTCTTCGAGAAATGCGAGTTCTTGAAAATCTGAAG
AATATGATCCACGAAACAAATGAACACACTCTCCCCAAATGTAGAGAAACTATGCAGGACAACTTACAGCAAGTCCTCCA
GAGATTGCAAGCGGCTAATGACTCAGTCTGTAGACTCCAACAGAGAGAACAGGAACGAAAAAAGATGTATAATGACCGCT
TGGTGGCTAACGAGAAGCGGCGCAGCCTCCAGTGGGAAGAGTTTATGAAGGAACAGCCCCAGAAGCGGGCAGCAGTGGAC
GAAGAGCACAGGAAGGCGGTGGCCAGGCTGCGGGAGCAGTATGCCGAGATGCAGAAGGACCTCGCCAAGTTTGCAACCTT
CTAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .64 RPM
SRP017611_kidney 10 .85 RPM
SRP017611_liver 3 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017324 ortholog_one2one 1 retrogene
retro_amel_1747,
Bos taurus ENSBTAG00000039732 ortholog_one2one 2 retrogenes
retro_btau_1699, retro_btau_1747,
Monodelphis domestica ENSMODG00000010026 ortholog_one2one 1 retrogene
retro_mdom_1483,
Otolemur garnettii ENSOGAG00000030827 ortholog_one2one 1 retrogene
retro_ogar_2470,
Ictidomys tridecemlineatus ENSSTOG00000027342 ortholog_one2one 3 retrogenes
retro_itri_1038, retro_itri_179, retro_itri_1901,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_269 79.63 86.63
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2. retro_ocun_1051 96.77 99.47
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Download FASTA sequences of all ENSOCUG00000025755 retrocopies