Parental gene:

NAA38, ENSOCUG00000017359

Aliases:LOC100358159, LSM8
Description:N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Source:HGNC Symbol;Acc:20471]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:26908065..26915462(-)


>ENSOCUG00000017359
ATGACGTCCGCTTTGGAAAACTACATAAACCGTAGAACGGTAGCTGTTATTACTTCCGATGGGAGAATGATCGTGGGAAC
ACTGAAAGGCTTTGACCAGACCATTAATTTGATTTTGGATGAAAGCCATGAACGAGTATTCAGCTCATCACAGGGAGTAG
AACAGGTGGTACTAGGGTTATACATCGTAAGAGGTGACAATGTTGCAGTCATTGGAGAAATTGATGAAGAGACAGATTCA
GCACTTGACTTGGGGAATATTCGAGCAGAACCTCTGAACTCTGTAGCACACTGA

Library Parental gene expression (RPM)
SRP017611_brain 13 .80 RPM
SRP017611_kidney 6 .39 RPM
SRP017611_liver 2 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001162 ortholog_one2one 1 retrogene
retro_amel_1716,
Echinops telfairi ENSETEG00000011594 ortholog_one2one 1 retrogene
retro_etel_491,
Felis catus ENSFCAG00000023642 ortholog_one2one 1 retrogene
retro_fcat_1993,
Myotis lucifugus ENSMLUG00000006837 ortholog_one2many 1 retrogene
retro_mluc_161,
Macaca mulatta ENSMMUG00000015822 ortholog_one2one 1 retrogene
retro_mmul_2010,
Mustela putorius furo ENSMPUG00000007100 ortholog_one2one 1 retrogene
retro_mputfur_1440,
Otolemur garnettii ENSOGAG00000013377 ortholog_one2one 1 retrogene
retro_ogar_1071,
Ochotona princeps ENSOPRG00000014809 ortholog_one2one 2 retrogenes
retro_opri_1033, retro_opri_227,
Sarcophilus harrisii ENSSHAG00000018435 ortholog_one2one 1 retrogene
retro_shar_535,
Ictidomys tridecemlineatus ENSSTOG00000009039 ortholog_one2one 3 retrogenes
retro_itri_1623, retro_itri_364, retro_itri_679,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_954 78.57 100.00
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2. retro_ocun_1715 86.17 96.91
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Download FASTA sequences of all ENSOCUG00000017359 retrocopies