Parental gene:

NUS1, ENSOCUG00000011553

Aliases:None
Description:nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21042]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:106622958..106651983(+)


>ENSOCUG00000011553
ATGACGGGGCTGTACGAACTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGCCTGCACCGCACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGTCGCGCCGCCTCCGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGCCTCCGGCCGTCGGCAGGAACCGCCGGCACTACCGGCACCCGCGCGGGGGGCCGGGTCTGGCCTCC
GCCCACCCCCGGCTGCGCTGGCGCGCGGACGGCCGTTCCCTGGACAAGCTGCCTGTGCACATGGGCTTAGTGATCACCGA
GGAGGAGCAGGAGCCCAGCTTCTCGGACATCGCGAGCCTCGTAGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAACAATTCCAGACTGATGGATGAAATTTTAAAACAGCAACAGGAACTTCTG
GGCCTGGATTGTTCCAAATACTCAACAGAGTTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTGCCATTCAGC
AGTGAAGGTGCTGTCCCCAGAAGATGGAAAAGCAGATATTGTGAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGC
AGCAAAAGAAATCCACAGATTTGGATGTAGATATGTTAGACAGTTTACTTAGTTCAAATGGTTTCCCTGATCCTGATTTA
GTACTGAAGTTTGGTCCTATGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCC
TTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGCGAACAACGTCTGGGAAAGT
AA

Library Parental gene expression (RPM)
SRP017611_brain 11 .20 RPM
SRP017611_kidney 12 .06 RPM
SRP017611_liver 6 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001780 ortholog_one2one 1 retrogene
retro_dnov_1639,
Erinaceus europaeus ENSEEUG00000008948 ortholog_one2one 1 retrogene
retro_eeur_443,
Homo sapiens ENSG00000153989 ortholog_one2one 4 retrogenes
retro_hsap_1174, retro_hsap_1176, retro_hsap_1289, retro_hsap_4825,
Gorilla gorilla ENSGGOG00000022321 ortholog_one2one 4 retrogenes
retro_ggor_1012, retro_ggor_914, retro_ggor_915, retro_ggor_993,
Microcebus murinus ENSMICG00000007831 ortholog_one2one 1 retrogene
retro_mmur_423,
Nomascus leucogenys ENSNLEG00000013457 ortholog_one2one 1 retrogene
retro_nleu_2411,
Pongo abelii ENSPPYG00000025886 ortholog_one2many 1 retrogene
retro_pabe_81,
Pan troglodytes ENSPTRG00000018547 ortholog_one2many 1 retrogene
retro_ptro_808,
Tarsius syrichta ENSTSYG00000003212 ortholog_one2one 1 retrogene
retro_tsyr_633,
Tursiops truncatus ENSTTRG00000007352 ortholog_one2one 2 retrogenes
retro_ttru_358, retro_ttru_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1713 91.92 100.00
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Download FASTA sequences of all ENSOCUG00000011553 retrocopies