Parental gene:

TPM4, ENSOCUG00000009884

Aliases:None
Description:tropomyosin 4 [Source:HGNC Symbol;Acc:12013]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018776:769119..788490(+)


>ENSOCUG00000009884
ATGGAGGCCATCCGAAAGAAGATGCAGATGTTGAAGCTGGACAAGGAGAACGCCGTGGACCGCGCCGAGCAGGCCGAGGC
GGACAGGAAGGCAGCCGAGGACAGATGCAAGCAGGTGGAAGAGGAGCTGGCGCATCTGCAGAAGAAGCTGAAAGGCGCGG
AGGACGAGCTGGACAAGCACTGTGAGGAGCTCAGGGACGCGCAGGAGAAACTGGACCTGAGCGAGAAGAAGGCCTCCGAC
GCTGAGGGCGATGTGGCAGCTCTAAATCGGCGCATCCAGCTCGTGGAGGAGGAGTTGGACAGAGCTCAGGAGCGGCTGGC
CACCGCCCTGCAGAAACTGGAAGAGGCGGAGAAGGCTGCAGATGAGAGCGAGAGGGGAATGAAGGTGATCGAAAACCGGG
CCATGAAAGATGAGGAGAAGATGGAAATCCAAGAGATGCAACTAAAAGAAGCCAAGCACATTGCGGAGGAGGCGGACCGC
AAGTACGAGGAGGTAGCCCGGAAGTTGGTCATCCTGGAAGGCGAGCTGGAAAGGGCGGAAGAGCGAGCCGAGGTGTCTGA
GCTAAAATGTGGCGATCTTGAAGAAGAGCTCAAGAATGTCACCAATAATCTGAAGTCGCTGGAGGCCGCCTCTGAGAAGT
ATTCTGAAAAGGAAGATAAATACGAAGAAGAAATTAAACTTCTGTCCGACAAGCTGAAAGAGGCCGAGACACGCGCGGAA
TTTGCAGAGAGAACGGTCGCCAAACTGGAAAAGACCATCGATGACCTGGAAGAAAAACTCGCCCAGGCAAAAGAAGAGAA
CGTGGGCTTACATCAGACACTGGACCAGACGCTAAACGAACTTAACTGTATATAA

Library Parental gene expression (RPM)
SRP017611_brain 34 .27 RPM
SRP017611_kidney 40 .24 RPM
SRP017611_liver 23 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014135 ortholog_one2one 1 retrogene
retro_cjac_206,
Homo sapiens ENSG00000167460 ortholog_one2one 2 retrogenes
retro_hsap_2623, retro_hsap_3969,
Gorilla gorilla ENSGGOG00000014510 ortholog_one2one 4 retrogenes
retro_ggor_1836, retro_ggor_2665, retro_ggor_2801, retro_ggor_609,
Oryctolagus cuniculus ENSOCUG00000011821 within_species_paralog 2 retrogenes
retro_ocun_699, retro_ocun_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1652 58.54 56.34
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Download FASTA sequences of all ENSOCUG00000009884 retrocopies