Parental gene: | HIAT1, ENSOCUG00000007819 |
| Aliases: | None |
| Description: | hippocampus abundant transcript 1 [Source:HGNC Symbol;Acc:23363] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:64066946..64113558(-) |
>ENSOCUG00000007819
ATGACCCAGGGGAAGAAGAAGAAACGGGCCGCGAACCGCAGTATCATGCTGGCCAAGAAGATCATCATTAAGGACGGAGG
CACGCCTCAAGGGATAGGTTCTCCTAGTGTTTATCATGCGGTTATTGTCATCTTTTTGGAGTTTTTTGCTTGGGGACTGT
TGACAGCACCCACCTTGGTGGTATTACATGAAACTTTCCCTAAACATACATTTCTGATGAATGGCCTAATTCAAGGAGTA
AAAGGTTTGTTGTCATTCCTCAGTGCCCCGCTTATTGGTGCTCTTTCTGATGTTTGGGGCCGAAAATCGTTCCTGCTGCT
AACAGTATTTTTCACATGTGCCCCAATTCCCTTAATGAAGATCAGCCCATGGTGGTACTTTGCTGTTATCTCTGTTTCTG
GGGTTTTTGCAGTGACTTTCTCCGTGGTATTTGCTTATGTAGCGGATATAACCCAAGAGCATGAAAGAAGTATGGCTTAT
GGATTGGTTTCAGCAACATTTGCTGCAAGTTTAGTCACCAGCCCTGCAATTGGAGCTTACCTTGGACGAGTATATGGGGA
CAGTTTAGTGGTGGTGTTAGCTACAGCAATAGCTTTGCTAGATATTTGTTTTATCCTTGTTGCCGTGCCAGAGTCATTGC
CTGAGAAGATGCGACCAGCATCGTGGGGCGCGCCCATTTCCTGGGAGCAGGCTGATCCTTTTGCATCCTTAAAAAAAGTG
GGCCAGGATTCCATAGTGCTGCTAATCTGCATTACCGTGTTTCTCTCCTACCTACCGGAGGCAGGCCAATATTCCAGCTT
TTTTTTATACCTCAGACAGATAATGAAATTTTCACCAGAAAGCGTTGCAGCATTTATAGCAGTCCTTGGCATTCTTTCCA
TTATTGCACAGACCATAGTCTTGAGTCTGCTTATGAGGTCAATTGGAAATAAGAACACCATTTTATTGGGTCTGGGATTT
CAGATATTACAGCTGGCATGGTATGGTTTCGGTTCAGAACCTTGGATGATGTGGGCTGCCGGGGCAGTGGCGGCCATGTC
CAGCATCACCTTTCCAGCTGTCAGTGCGCTCGTTTCACGAACTGCTGATGCTGATCAACAGGACAACTTAGGTGTTGTTC
AAGGAATGATAACAGGAATTCGAGGATTGTGCAATGGCCTGGGACCAGCCCTTTATGGATTCATTTTCTACATTTTCCAT
GTGGAACTTAAAGAACTGCCAATAACAGGAACAGACTTGGGAACAAACACAAGCCCCCAGCACCACTTTGAGCAGAATTC
CATCATCCCTGGCCCCCCTTTCCTTTTCGGAGCCTGTTCGGTGCTGCTGGCTCTGCTTGTTGCCTTGTTTATTCCAGAAC
ATACCAATTTAAGCTTAAGGTCCAGCAGTTGGAGAAAGCACTGTGGCAGTCACAGCCATCCTCATAGTACGCAAGCACCA
GGAGAGGCCAAAGAACCTTTACTCCAGGACACAAACGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 42 .50 RPM |
| SRP017611_kidney | 46 .02 RPM |
| SRP017611_liver | 15 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010468 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005809 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002112 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0035400 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1386 | 86.51 | 60.65 | Please wait, loading  |
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Download FASTA sequences of all ENSOCUG00000007819 retrocopies