Parental gene:

CCDC115, ENSOCUG00000005099

Aliases:None
Description:coiled-coil domain containing 115 [Source:HGNC Symbol;Acc:28178]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:59982612..59985069(-)


>ENSOCUG00000005099
ATGGCGGCCCGGGACGTGCGGACGGAACTGGATTCGCTGATCCTGCAGCTGCTCGCGGACTTGGAGGAGCTGGAGGCGAA
ACGGGCGGCGCTGAACGGCCGTGTGGAGGAGGGCTGGCTGTCGCTCGCCCAGGCGCGCTACGCCATGGGTGTCAAGTCGG
TAGGCCCCCTGCAGTACGCCTCCCGCATGGAGCCCCAGGTGTGCGTGTGCGCCAGCGAGGCCCCGGACGGACTCCAGAAC
TTGCGAGTGGTGAGAGCCGGCGCCCAGATTCCGGAGGAGGTGGGGCCCCGCGAGGCAGCTCTGCGCCGGCGCAAGGGCCC
CACCAAGACGCCGGAGCCTGAGTCTACCACAGCGCCCCAGGACCCCCTGAACTGGTTTGGAATCCTGGTTCCTCACAGTC
TGCGGCAGGCGCAAGCCAGTTTCCGGGATGGCCTGCAGCTGGCTGGGGACATTGCCACCCTCCAGATCCGCATCAGCTGG
GGTCAGAGCCAGCTCCGGAAGCTCCAGGAGAAACTCAGGCAGCTTGAACCTGGGGCTGCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 7 .34 RPM
SRP017611_kidney 9 .63 RPM
SRP017611_liver 3 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Monodelphis domestica ENSMODG00000010588 ortholog_one2many 2 retrogenes
retro_mdom_200, retro_mdom_435,
Mus musculus ENSMUSG00000042111 ortholog_one2one 2 retrogenes
retro_mmus_2696, retro_mmus_380,
Otolemur garnettii ENSOGAG00000000166 ortholog_one2one 2 retrogenes
retro_ogar_2849, retro_ogar_3466,
Tursiops truncatus ENSTTRG00000012598 ortholog_one2one 1 retrogene
retro_ttru_781,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1651 77.47 98.89
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Download FASTA sequences of all ENSOCUG00000005099 retrocopies