Parental gene: | CENPN, ENSOCUG00000000024 |
| Aliases: | None |
| Description: | centromere protein N [Source:HGNC Symbol;Acc:30873] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 5:35461391..35487851(+) |
>ENSOCUG00000000024
ATGGATGAAACTATTGCTGAGTTTATCAGGAGGACCATCTTGAAAATCCCCATGTCTGAAATGATGACAGTCCTCGAAGC
CTGGAATTTTTTGTCTGAAAGTCAACTGCAGACGTTAAACTTGCGGCAGAGAAAGGACTCTCTTGCTCAAAGTGTGGTTC
TGCTGTGTGAGGAGAAGTGTGCCAGTCTCAGCGATGCAGCCCTTCTAGACATCGTTTGTACTCAAGTTCATCGGCACCAG
AAAATCTGGGATGTTTATCAGATGAGTAAAGGACCAGGTGAAGACCTCGACCTGTTTGATATAGAACAGTTCAAAAGTTC
ATTTAAGAAAATTCTTCAGAGAGCACTAAGAAATGTGACGGTCAGCTTCAGAGATGCCGAGGAGAATGCAGTCTGGATCC
GAATTGCCTGGGGAACGCAGTACACTAAGCCAAACCAGTACAAGCCTACTTACGTGGTGTACTACTCCCACACTCCCTAT
GCCTTCACTTCTTCCTCCAGGCTCAAGAGCAATATCCCCCTGCTGGGTCAGGCCCTGACAGTCGCTAGCAAACACCATCA
GATTGTGAAGATGGACCTGAGAAGCAGATACCTAGACTCTCTGAAGGCTATTGTTTTCAAGCAGTATAATCAGAACTTTG
AAATCCACAACCCTACAGCACCTCTACAGGAAAGGAGCGTTGGGCTGGACATAAACACAGATTCAAGGATCATTCATGAA
AATGCAGTAGAAAAAGACAAAGTACAGAGAATAACTCAAGAAACTTTTGGAGACTACCCTCAACCACGACTAGAATTTGC
ACAGTATAAGCTCGAAACAAAGTTCAAAAGTGACTTAAATGGGGGCATCCTGGCTGACAGGGAAGAACCACTGAGGTGCC
TGATAAAGTTCTCCAGCCCACATCTTTTGGAAGCTTTGAAATCCTTAGCACCAGCCGGAATTGCAGATGCACCACTCTCT
CCACTGCTCACTTGCATACCCAGCAGGGGAATGAATTATTTTAAAATTAGAGACAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .42 RPM |
| SRP017611_kidney | 3 .24 RPM |
| SRP017611_liver | 1 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011635 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000004978 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000166451 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002111 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007345 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000039 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_528 | 76.47 | 79.35 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_ocun_1676 | 77.18 | 60.18 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_ocun_1806 | 76.73 | 58.70 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSOCUG00000000024 retrocopies