Parental gene:

RPL32, ENSNLEG00000004789

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397298.1:20444335..20452631(-)


>ENSNLEG00000004789
ATGGCCGCCCTCAGACCCCTTGTGAAGCCCAAGATCGTCAAAAAGAGAACCAAGAAGTTCATCCGGCACCAGTCAGACCG
ATATGTCAAAATTAAGCGTAACTGGCGGAAACCCAGAGGCATTGACAACAGGGTTCGTAGAAGATTCAAGGGCCAGATCT
TGATGCCCAACATTGGTTATGGAAGCAACAAAAAAACAAAGCACATGCTGCCCAGTGGCTTCCGGAAGTTCCTGGTCCAC
AACGTCAAGGAGCTGGAAGTGCTGCTGATGTGCAACAAATCTTACTGTGCCGAGATCGCTCACAATGTTTCCTCCAAGAA
CCGCAAAGCCATCGTGGAAAGAGCTGCCCAATTGGCCATCAGAGTCACCAACCCCAATGCCAGGCTGCGCAGCGAAGAAA
ATGAGTAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014763 ortholog_one2many 3 retrogenes
retro_acar_104, retro_acar_125, retro_acar_67,
Ailuropoda melanoleuca ENSAMEG00000004583 possible_ortholog 26 retrogenes
retro_amel_1004, retro_amel_1041, retro_amel_1059, retro_amel_112, retro_amel_1274, retro_amel_1284, retro_amel_13, retro_amel_1394, retro_amel_1450, retro_amel_150, retro_amel_1651, retro_amel_168, retro_amel_1766, retro_amel_1827, retro_amel_1897, retro_amel_274, retro_amel_275, retro_amel_44, retro_amel_573, retro_amel_658, retro_amel_71, retro_amel_776, retro_amel_781, retro_amel_871, retro_amel_892, retro_amel_923,
Bos taurus ENSBTAG00000015283 possible_ortholog 10 retrogenes
retro_btau_1102, retro_btau_1391, retro_btau_1568, retro_btau_1645, retro_btau_1728, retro_btau_1764, retro_btau_377, retro_btau_623, retro_btau_631, retro_btau_654,
Choloepus hoffmanni ENSCHOG00000013534 possible_ortholog 27 retrogenes
retro_chof_1131, retro_chof_1164, retro_chof_1181, retro_chof_1234, retro_chof_1461, retro_chof_152, retro_chof_1821, retro_chof_1957, retro_chof_2022, retro_chof_205, retro_chof_2090, retro_chof_2146, retro_chof_2242, retro_chof_2265, retro_chof_2301, retro_chof_2410, retro_chof_2509, retro_chof_2527, retro_chof_2606, retro_chof_276, retro_chof_286, retro_chof_313, retro_chof_554, retro_chof_585, retro_chof_607, retro_chof_758, retro_chof_913,
Equus caballus ENSECAG00000007201 possible_ortholog 4 retrogenes
retro_ecab_1115, retro_ecab_26, retro_ecab_369, retro_ecab_698,
Loxodonta africana ENSLAFG00000032737 ortholog_one2one 1 retrogene
retro_lafr_14,
Macaca mulatta ENSMMUG00000001340 possible_ortholog 6 retrogenes
retro_mmul_106, retro_mmul_117, retro_mmul_126, retro_mmul_79, retro_mmul_93, retro_mmul_95,
Mustela putorius furo ENSMPUG00000017189 ortholog_one2one 4 retrogenes
retro_mputfur_121, retro_mputfur_76, retro_mputfur_8, retro_mputfur_85,
Pongo abelii ENSPPYG00000013391 possible_ortholog 2 retrogenes
retro_pabe_135, retro_pabe_98,
Rattus norvegicus ENSRNOG00000010746 possible_ortholog 4 retrogenes
retro_rnor_179, retro_rnor_27, retro_rnor_278, retro_rnor_327,
Sarcophilus harrisii ENSSHAG00000012782 ortholog_one2many 1 retrogene
retro_shar_580,
Sus scrofa ENSSSCG00000027637 ortholog_one2one 9 retrogenes
retro_sscr_1001, retro_sscr_1054, retro_sscr_107, retro_sscr_1081, retro_sscr_165, retro_sscr_76, retro_sscr_793, retro_sscr_957, retro_sscr_989,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_56 97.78 100.00
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2. retro_nleu_125 73.72 100.00
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3. retro_nleu_193 91.73 97.78
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4. retro_nleu_224 78.83 99.26
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5. retro_nleu_442 94.07 100.00
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6. retro_nleu_497 92.54 99.26
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7. retro_nleu_603 66.91 99.26
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8. retro_nleu_1109 94.81 100.00
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9. retro_nleu_1452 58.27 100.00
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10. retro_nleu_1642 96.30 100.00
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11. retro_nleu_2808 92.59 100.00
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12. retro_nleu_2809 94.12 100.00
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Download FASTA sequences of all ENSNLEG00000004789 retrocopies