Parental gene: | Nop56, ENSMUSG00000027405 |
| Aliases: | Nop56, 2310044F10Rik, Nol5a |
| Description: | NOP56 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1914384] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:130274429..130279313(+) |
>ENSMUSG00000027405
ATGGTTCTGCTGCACGTGCTGTTCGAGCATGCGGTCGGCTACGCGCTGTTGGCGCTGAAGGAAGTGGAGGAGATCAGCCT
GCTGCTGCCGCAGGTGGAGGAATGTGTGCTTAACCTTGGCAAATTCCACAATGTCGTTCGTCTGGTGGCCTTCTGTCCCT
TCTCTTCATCCCAGGTGGCCTTGGAAAATGCCAATGCTGTGTCTGAAGGTGTTGTTCACGAGGACCTCCGCCTGCTCCTG
GAGACATACCTGCCATCTAAAAAGAAGAAAGTACTTCTGGGGGTTGGAGACCCCAAGATTGGTGCTGCAATACAGGAAGA
GTTGGGGTACAACTGCCAGACTGGTGGTGTGATAGCTGAGATCCTTCGAGGAGTTCGTCTGCATTTCCATAATCTGGTGA
AGGGTCTGACAGATCTTTCTGCTTGTAAGGCCCAGCTAGGGCTGGGACACAGCTACTCTCGTGCCAAAGTTAAATTTAAT
GTGAACCGAGTGGACAACATGATTATTCAGTCCATAAGCCTCCTGGACCAACTGGATAAAGATATCAATACCTTCTCGAT
GCGCGTCAGGGAGTGGTATGGGTACCACTTTCCAGAGCTGGTGAAGATCGTCAATGACAACGCCACATACTGTCGCTTGG
CTCAGTTCATTGGGAACCGCAGGGAGCTGAATGAAGAGAAGTTAGAGAAACTGGAAGAAATTACGATGGACGGGGCCAAG
GCTAAGGCCATCTTGGATGCTTCTCGGTCCTCCATGGGCATGGACATATCTGCTATCGACTTGATAAACATCGAGAGCTT
CTCCAGTCGTGTGGTGTCTTTGTCAGAGTATCGCCAGAGCCTACACACTTACCTTCGCTCCAAGATGAGCCAAGTAGCCC
CCAGCCTGTCAGCCTTAATTGGGGAAGCGGTAGGTGCACGCCTCATTGCTCATGCTGGCAGCCTCACCAACCTGGCCAAG
TATCCAGCGTCCACAGTACAGATCCTTGGGGCTGAAAAGGCCCTGTTCAGAGCCCTGAAGACAAGGGGTAACACACCAAA
ATATGGACTCATTTTTCATTCCACCTTCATTGGCCGAGCAGCTGCAAAGAACAAAGGCCGTATCTCCCGATACCTAGCAA
ACAAATGCAGTATTGCCTCAAGAATTGATTGCTTCTCTGAGGTCCCCACAAGTGTATTTGGGGAAAAACTCCGAGAACAA
GTTGAGGAACGGCTGTCTTTCTATGAGACTGGAGAGATCCCACGGAAGAACCTGGATGTCATGAAGGAAGCTGTGGTTCA
GGCAGAGGAAGCGGCTGCTGAAATCACCAGAAAGCTGGAAAAACAGGAGAAGAAGCGCTTGAAGAAGGAAAAGAAGCGAC
TGGCTGCACTGGCCCTGGCCTCGTCAGAAAACAGCAGTACCCCAGAGGAGTGTGAGGAGGTAAATGAAAAATCTAAGAAG
AAAAAGAAGTTAAAACCCCAGGAAAATGGAATGGAAGACCCACCTGTCTCTCTACCTAAATCCAAGAAAAAGAAAGCTCC
CAAGGAGGAGTTGGCCAGTGACCTTGAAGAGATGGCCACTAGCAGTGCTAAGAGAAAGAAGTCCTCACCTAAGGAGGAAG
TGGCCAGTGAACCAGAAGAGGCAGCAAGCCCCACCACCCCTAAGAAGAAAAGGAAATTTTCTGAGGAGCCTGAAGTTGCT
GCTAACTTCACAAAGAGCAGCACAAAGAAAAAGAAAAAGTCCCAGAAAGCACAGGAGGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 49 .37 RPM |
| SRP007412_cerebellum | 47 .46 RPM |
| SRP007412_heart | 18 .15 RPM |
| SRP007412_kidney | 18 .17 RPM |
| SRP007412_liver | 19 .31 RPM |
| SRP007412_testis | 9 .33 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1803 | 97.75 | 89.86 | Please wait, loading  |
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| 2. | retro_mmus_3330 | 95.80 | 86.82 | Please wait, loading |
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| 3. | retro_mmus_3553 | 90.00 | 63.06 | Please wait, loading |
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| 4. | retro_mmus_3574 | 89.63 | 88.18 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000027405 retrocopies