Parental gene:

Tyms, ENSMUSG00000025747

Aliases:Tyms, Ts
Description:thymidylate synthase [Source:MGI Symbol;Acc:MGI:98878]
Organism:Mouse (Mus musculus)
Coordinates:5:30058201..30073617(-)


>ENSMUSG00000025747
ATGCTGGTGGTTGGCTCCGAGCTGCAGTCCGATGCTCAGCAGCTGAGCGCGGAAGCCCCACGGCATGGAGAACTCCAGTA
CCTGAGGCAGGTGGAGCACATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCACGGGCACTGGCACCCTGTCGGTGTTCG
GCATGCAGGCACGATACAGCCTGAGAGATGAATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAAGGGTGTTTTGGAG
GAGTTGTTGTGGTTTATCAAGGGATCCACAAATGCTAAAGAATTGTCCTCAAAGGGAGTGAGAATCTGGGATGCCAATGG
ATCCCGAGATTTTCTGGACAGCTTGGGATTTTCTGCCCGACAGGAAGGGGACCTGGGCCCAGTTTATGGTTTCCAATGGA
GGCATTTTGGAGCAGAGTACAAAGATATGGATTCAGATTACTCGGGACAAGGAGTAGACCAGCTGCAAAAAGTGATTGAC
ACCATCAAAACCAACCCTGATGACAGAAGAATCATCATGTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCC
TCCTTGCCATGCCCTCTGTCAGTTCTATGTGGTGAATGGGGAACTGTCTTGCCAGCTTTACCAGAGGTCAGGAGATATGG
GTCTGGGCGTGCCCTTCAACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTGCAGCCAGGT
GATTTTGTCCACACTTTGGGAGATGCACATATTTACCTGAATCATATAGAGCCGCTGAAAATTCAGCTACAGCGAGAACC
AAGACCTTTCCCAAAGCTCAAAATCCTTCGAAAAGTTGAGACAATCGATGATTTCAAAGTTGAAGACTTTCAGATTGAAG
GGTATAATCCACATCCAACGATTAAAATGGAAATGGCTGTTTAG

Library Parental gene expression (RPM)
SRP007412_brain 1 .75 RPM
SRP007412_cerebellum 2 .34 RPM
SRP007412_heart 1 .59 RPM
SRP007412_kidney 7 .57 RPM
SRP007412_liver 4 .70 RPM
SRP007412_testis 1 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000009230 ortholog_one2one 2 retrogenes
retro_fcat_1107, retro_fcat_339,
Loxodonta africana ENSLAFG00000014910 ortholog_one2one 2 retrogenes
retro_lafr_1030, retro_lafr_635,
Macropus eugenii ENSMEUG00000009507 ortholog_one2one 1 retrogene
retro_meug_175,
Monodelphis domestica ENSMODG00000021479 ortholog_one2many 2 retrogenes
retro_mdom_1084, retro_mdom_1186,
Mustela putorius furo ENSMPUG00000005419 ortholog_one2one 2 retrogenes
retro_mputfur_1155, retro_mputfur_860,
Otolemur garnettii ENSOGAG00000024349 ortholog_one2one 2 retrogenes
retro_ogar_2956, retro_ogar_3211,
Sarcophilus harrisii ENSSHAG00000003102 ortholog_one2one 1 retrogene
retro_shar_424,
Sus scrofa ENSSSCG00000023869 ortholog_one2one 2 retrogenes
retro_sscr_810, retro_sscr_841,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_584 87.13 65.47
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Download FASTA sequences of all ENSMUSG00000025747 retrocopies