Parental gene:

RCHY1, ENSMODG00000019197

Aliases:None
Description:ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17479]
Organism:Opossum (Monodelphis domestica)
Coordinates:5:22615656..22644684(-)


>ENSMODG00000019197
GTCATCCGCTGTCTGATTCAGGCTCCTTGCTGTGATAAATTTTATATCTGCCGCTTATGCCATGATAACAATGAAGATCA
TCCTCTGGACCGCTTTAAAGTAAAAGAAGTACAGTGTACGAAGTGTGGAAAAATTCAGAATGCTCAACAGATATGTGAAG
AATGTAGCACTGTTTTTGGAGAATATTATTGCAATATCTGCCACCTATTCGACAAAGACAAGAAGCAGTATCATTGTGAG
AAGTGTGGAATTTGTAGGATTGGTCCGAAGGAAGACTTTTTTCACTGTTTGAAATGTAACCTATGCCTATCCTTGAGTCT
CCAAGGGCATCACAAGTGTATTGAGAATGTTTCCAGGCAGAATTGTCCCATATGTTTGGAGGACATTCATACTTCCCGAG
TAGTTGCTCATGTCTTGCCATGTGGGCATCTTCTACACAGAACATGTTATGAAGAAATGTTAAAAGAAGGCTACAGGTGT
CCATTATGTATGCACTCTGCTCTAGACATGACTCGCTATTGGCGGCAGTTGGATAATGAAGTAGCCCAAACTCCAATGCC
AACAGAATATCAGAATATGACTGTGGAAATTCTTTGCAATGATTGCAGTGCCCGCTCTACAGTCCAGTTCCACATATTAG
GAATGAAATGTAAGAGCTGTGAGTCATATAATACTGCCCAGGATGGAGGATGTGGAATTCCTTTAGAACAACAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032536 ortholog_one2one 1 retrogene
retro_cfam_1449,
Choloepus hoffmanni ENSCHOG00000011650 ortholog_one2one 1 retrogene
retro_chof_1142,
Macropus eugenii ENSMEUG00000003266 ortholog_one2one 1 retrogene
retro_meug_1564,
Rattus norvegicus ENSRNOG00000002546 ortholog_one2one 2 retrogenes
retro_rnor_1127, retro_rnor_607,
Tursiops truncatus ENSTTRG00000013786 ortholog_one2one 1 retrogene
retro_ttru_1333,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_314 65.26 79.41
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2. retro_mdom_991 71.07 50.84
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Download FASTA sequences of all ENSMODG00000019197 retrocopies