Parental gene:

UBA2, ENSMODG00000011934

Aliases:None
Description:ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:425491239..425526803(-)


>ENSMODG00000011934
ATGCGCAGGAGCGGAAATTTCCTCTTCCTCCCCCTTCAGTTCCGGTCCGCGGCGGTCGCCTCACCGCCCCCCTTCCGTCT
GCCTCTTCTTCTCCCACCCTCCCTCTGCCAGCCTGTGTGTCCGTGGATCGGGCAGTGTGTCCGTGGGTGGGTCCTGGCCG
TGGGGGGGGGGAGGGTGGCCGCCATGGCGCTGTCGCGGGGGCTGCCCAAAGAGCTGGCAGAGGCTGTGGCTGGGGGCCGG
GTATTGGTAGTCGGCGCGGGCGGCATCGGCTGCGAGCTCCTCAAGAACCTGGTGCTCAGCGGCTTCGCGCACATCGACCT
GATTGATCTGGATACTATTGATGTCAGCAATCTCAACAGGCAATTTTTGTTTCAAAAGAAGCATGTAGGAAGGTCGAAGG
CACAGGTTGCTAAGGAAAGTGTTTTGCAGTTTTATCCAGAAGCTAATATTATAGCCTACCATGACAGCATCATGAACCCT
GATTATAATGTGGAATTCTTTCGGCAGTTTACATTGGTCATGAATGCTTTAGATAACAGAGCCGCACGAAACCATGTGAA
TAGAATGTGTCTAGCAGCTGATGTTCCTCTTATAGAAAGTGGAACTGCTGGCTATCTTGGACAAGTAACAGTTATCAAAA
AGGGTGTGACAGAATGTTATGAATGCCATCCTAAACCAACACAGAAAACTTTCCCGGGATGTACAATTCGTAACACACCT
TCAGAACCTATCCACTGTATTGTATGGGCAAAATATTTGTTCAACCAGTTGTTTGGGGAAGAAGATGCTGATCAGGAAGT
ATCCCCTGACAGAGCTGATCCTGAAGCTGCTTGGGAACCAGCAGAAGCTGAAGCCAGAGCAAGAGCATCTAATGATGATG
GTGATATTAAGCGTATTTCCACTAAAGAATGGGCTAAATCAACTGGATATGATCCAGTTAAACTCTTTACCAAGCTTTTC
AAGGATGATATCAGATATTTATTGACAATGGATAAACTGTGGAGGAAAAGGAAGCCTCCTGTGCCATTAGACTGGACTGA
AGTTCAGAGTCAAGAAATAAATTCAGGAGATCAACAAAATGATTCCACCTTAGGTTTAAAAGACCAACAGGTTCTGGATG
TCAAAAGCTATGCACGTCTTTTTTCAAAGAGTATTGAAACCTTGAGAGTTCATCTAGCTGAAAAAGGTGATGGAGCTGAA
CTCATTTGGGACAAGGATGACCCATCAGCAATGGATTTTGTTACATCTGCAGCGAACCTCCGGATGCATATTTTCAGTAT
GAATATGAAGAGTAGATTTGATATCAAATCAATGGCTGGAAATATCATTCCTGCAATAGCTACCACTAATGCAGTGATTG
CTGGGCTGATAGTCCTGGAAGGTTTGAAAATTTTATCAGGAAAAATAGATCAGTGTAGAACGATCTTTTTGAACAAACAG
CCAAATCCAAGAAAGAAACTACTTGTGCCTTGTGCATTGGATCCTCCCAATCCTAATTGTTATGTTTGTGCCAGCAAGCC
TGAGGTAACAGTGAAATTGAATGTCCACAAAGTCACAGTCCTTACATTACAGGATAAGATAGTGAAAGAAAAATTTGCCA
TGGTAGCACCAGATGTACAGATTGAAGATGGCAAAGGAACCATCCTGATATCTTCAGAAGAGGGAGAAACAGAAGCTAAT
AATTATAAGAAGTTGTCAGAGTTTGGAATTAGAAATGGCAGCAGGCTTCAAGCAGATGATTTCCTTCAGGATTATACATT
ACTGATCAATGTTCTCCATAGTGACGACCTAGAAAAAGATGTGGAATTTGAAGTTGTTGGAGATGCTCCTGAAAAAGTGG
GGCCAAAGCAGGCAGAACAGTCAGCTAAAAACATCAGTAATGGCAGTGATGATGGGGCACAGCCATCTACATCAACAGCT
CAAGATCAAGATGATGTGCTGATCGTTGATTCAGATGAAGAAGCCCCTTCAAGTAATACTGCTGATGTCACTGAGGAAGA
CTCAGCCCGGAAGAGAAAGTTAGATGACAAAGAACATGTCAACGCAAAGAGGCCCCGTACAGAACAGTCTGAAGAGCTAG
ATGACATTATAGCATTAGATTGA

Library Parental gene expression (RPM)
SRP007412_brain 324 .81 RPM
SRP007412_cerebellum 297 .73 RPM
SRP007412_heart 119 .01 RPM
SRP007412_kidney 243 .61 RPM
SRP007412_liver 204 .42 RPM
SRP007412_testis 486 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011975 ortholog_one2one 3 retrogenes
retro_chof_1034, retro_chof_548, retro_chof_848,
Myotis lucifugus ENSMLUG00000003047 ortholog_one2many 1 retrogene
retro_mluc_286,
Pongo abelii ENSPPYG00000009837 ortholog_one2one 1 retrogene
retro_pabe_304,
Rattus norvegicus ENSRNOG00000021113 ortholog_one2one 1 retrogene
retro_rnor_939,
Sus scrofa ENSSSCG00000002876 ortholog_one2one 1 retrogene
retro_sscr_941,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1509 90.97 67.57
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Download FASTA sequences of all ENSMODG00000011934 retrocopies