Parental gene:

AP3M1, ENSMODG00000000660

Aliases:None
Description:adaptor-related protein complex 3, mu 1 subunit [Source:HGNC Symbol;Acc:569]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:50893324..50909338(-)


>ENSMODG00000000660
ATGATCCACAGTCTGTTCCTCATAAACTGTTCCGGTGACATCTTCCTAGAGAAGCATTGGAAGAGTGTCGTGAGCCAGTC
TGTCTGTGACTATTTCTTTGAAGCCCAGGAGAAAGCTGCTGATGTGGAAAATGTGCCACCTGTCATCTCAACACCTCACC
ACTACCTCATCAGCATCTATAGAGACAAACTCTTCTTTGTATCCGTCATACAGACAGAAGTGCCACCACTCTTTGTCATC
GAATTTCTGCATCGAGTCGCAGACACTTTTCAGGACTACTTTGGGGAGTGTTCAGAGGCTGCGATTAAGGATAATGTGGT
CATAGTATATGAACTCTTGGAAGAAATGTTAGATAATGGATTTCCCCTGGCAACTGAATCTAACATCTTGAAAGAACTGA
TTAAACCACCAACAATTCTGCGCTCTGTTGTCAATTCTATTACAGGCAGTAGTAATGTTGGAGACACACTCCCCACTGGC
CAGCTTTCCAACATCCCATGGCGTCGTGCAGGTGTGAAATACACAAACAATGAAGCTTATTTTGATGTCATTGAAGAAAT
AGATGCAATTATAGACAAATCAGGTTCCACAGTCTTTGCAGAAATTCAAGGTGTCATTGATGCTTGCATTAAGCTTTCCG
GAATGCCTGATCTTTCCCTTTCTTTCATGAACCCAAGGCTTCTAGATGATGTCAGCTTCCACCCCTGCATTCGTTTCAAA
CGCTGGGAGTCAGAAAGAGTCCTGTCATTTATTCCTCCAGATGGAAACTTCCGACTCATTTCCTACCGTGTCAGCTCACA
AAATTTAGTGGCAATTCCAGTGTATGTGAAACATAGCATCAGCTTTAAGGAGAACAGCTCTTGTGGCAGATTCGATATTA
CAATTGGACCAAAGCAAAACATGGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTATTGAAT
ATGAACCTAACTCCAACACAAGGCAGCTACACGTTTGATCCAGTCACCAAGGTCTTAACATGGGATGTTGGGAAAATTAC
CCCCCAGAAGCTCCCAAGTCTTAAAGGATTGGTGAATTTACAGTCTGGAGCCCCCAAACCGGAAGAAAACCCAAGCCTCA
ACATTCAGTTCAAGATTCAGCAACTTGCTATTTCAGGCTTGAAAGTCAATCGCCTTGATATGTATGGAGAGAAATATAAG
CCATTTAAAGGAGTCAAATATATCACAAAAGCTGGGAAGTTCCAAGTGAGGACATGA

Library Parental gene expression (RPM)
SRP007412_brain 123 .85 RPM
SRP007412_cerebellum 181 .51 RPM
SRP007412_heart 122 .80 RPM
SRP007412_kidney 330 .52 RPM
SRP007412_liver 172 .70 RPM
SRP007412_testis 157 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004510 ortholog_one2one 1 retrogene
retro_chof_2586,
Monodelphis domestica ENSMODG00000005838 within_species_paralog 2 retrogenes
retro_mdom_1571, retro_mdom_451,
Mus musculus ENSMUSG00000021824 ortholog_one2one 1 retrogene
retro_mmus_580,
Ictidomys tridecemlineatus ENSSTOG00000012881 ortholog_one2one 1 retrogene
retro_itri_1276,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1564 89.92 61.72
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Download FASTA sequences of all ENSMODG00000000660 retrocopies