Parental gene:

C11orf54, ENSMODG00000000412

Aliases:None
Description:chromosome 11 open reading frame 54 [Source:HGNC Symbol;Acc:30204]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:265416221..265433935(-)


>ENSMODG00000000412
ATGTTAGTTCTACAGAATGGACTTAAAAATAATTTTGCTGATGTCCAGGTCTCCGTAGTTGATTGCCCTGATCTGTCTAA
GGAACCATATACATTTCCTGTTAAAGGAATCTGTGGGAAACCGAGAATTGCAGAAGTAGGTGGGGTTCCTTACCTCATGC
CTCTTGTGAATCGAGAAAAGGTTTATGATATGAATACTGTTGCAAAGCAAATTGATCTTCCTGGGGCTTTTATTCTTGGA
GCAGGAGCAGCCCCATTTCAGACTCTTGGGATCAATGCTGAGTTTATGCCAATTGTCCAGACTGAAAGTGATCACAAGCC
TGCTGTGAATGGAAGCTACTTTGCCCAGATTAACCCTGCAGATGGAGGGTACCTGCTAGAGAAATATAGTGGGAAATACA
ATGACTTTGGATTTGCCTTACTGGCTAATCTCTTTGCTAGTGAAGGCCAGCCTGGCAAGATTTTAGAGCTAGTAAAAGCC
AAAGGAAGAACTGGAAAGTACAATTTTGTGACTTGTATGAGACAAACTCTTGAAAAGCATTATGGAGATAAACCTGTAGG
GATGGGAGGCACATTTGTTGTTCAAAAAGGAAAAGTAAAGATTCATATCATGCCCCCAGAATTTTCTTCTTGCCCACTGA
ACTCTGATGAAGATGTGAATAATTGGTTGCATTTTTTTGAAATCAAGGCTCCTTTGGTTTGTCAGCCAGTTTTTGTTTCT
CGAGACCCGGGGTTTGATTTACGATTAGAGCATACACACTGTTTTAGTCATCATGGAGAAGGAGGACACTATCATTATGA
CACCACTCCAGATACAGTGGAGTATCTTGGGTATTTCCTACCTGCTGAGGTTCTCTATCGAATTGATAAACCAAAGGACA
CCCATACATTTGGGCGAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013446 ortholog_one2one 1 retrogene
retro_chof_593,
Cavia porcellus ENSCPOG00000014146 ortholog_one2one 1 retrogene
retro_cpor_1286,
Otolemur garnettii ENSOGAG00000002523 ortholog_one2one 1 retrogene
retro_ogar_3359,
Tupaia belangeri ENSTBEG00000007819 ortholog_one2one 1 retrogene
retro_tbel_4251,
Tursiops truncatus ENSTTRG00000001140 ortholog_one2one 3 retrogenes
retro_ttru_244, retro_ttru_334, retro_ttru_560,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_852 82.86 57.67
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2. retro_mdom_1467 94.97 99.33
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Download FASTA sequences of all ENSMODG00000000412 retrocopies