Parental gene:

MMU.3165, ENSMMUG00000005228

Aliases:None
Description:26S proteasome non-ATPase regulatory subunit 4 [Source:RefSeq peptide;Acc:NP_001130040]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:129627556..129695442(+)


>ENSMMUG00000005228
GTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATCGAAGTGTTGATTCCTCAGGAGAGACAACATACAAAAA
GACAACTTCATCAGCCTTGAAAGGTGCCATCCAGTTGGGCATTACCCACACTGTGGGGAGCCTGAGTACCAAACCAGAGC
GTGATGTCCTCATGCAAGATTTCTACGTGGTGGAGAGTATCTTCTTCCCCAGTGAAGGGAGCAACCTGACCCCTGCTCAT
CACTACAATGACTTTCGTTTCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCCGGGAGCTATTTGGTATCCGGCCCGA
TGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTCTGCAGCTCTGGAGCTAGTGGTTCCCTTTTCTATGTGT
CCAGTGATGATGAGTTCATTATTAAGACAGTCCAACATAAAGAGGCGGAGTTTCTGCAGAAGCTGCTTCCAGGATACTAC
ATGAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAATTCTATGGACTGTACTGTGTGCAGGCAGGTGGCAAGAACAT
TCGAATTGTGGTGATGAACAATCTTTTACCAAGATCGGTAAAAATGCATATCAAATATGACCTCAAAGGCTCAACCTATA
AACGGCGGGCTTCCCAGAAAGAGCGAGAGAAGCCTCTTCCCACATTTAAAGACCTAGACTTCTTACAAGACATCCCTGAT
GGTCTTTTTTTGGATGCTGACATGTACAACGCTCTCTGTAAGACCCTGCAGCGTGACTGTTTGGTGCTGCAGAGCTTCAA
GATAATGGATTATAGCCTCTTGATGTCAATCCATAATATAGATCATGCACAACGAGAGCCCTTAAGCAGCGAAACACAGT
ACTCAGTTGACACTCGAAGACCAGCCCCCCAAAAGGCTCTGTATTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGA
CGGGGTGGCACCATGGAGACTGATGACCATATGGGTGGCATCCCTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTTTA
TATTGGCATCATTGACATTCTGCAGTCTTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGGTACATGACG
GGGACACTGTCTCAGTGCATCGCCCAGGCTTCTACGCTGAACGGTTCCAGCGCTTCATGTGCAACACAGTATTTAAGAAG
ATTCCCTTGAAGCCTTCTCCCTCCAAAAAGTTTCGGTCTGGCTCATCTTTCTCTCGGCGAGTAGGCTCCAGTGGCAACTC
CTGCATTACTTACCAACCATCGGTCTCTGGGGAACACAAGGCACAAGTGACAACAAAGGCGGAAGTGGAGCCAGGCGTTC
ACCTTGGTCGTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAATCAGTGAGGGCTCACCTATTCCTGACCCCAGT
TTCTCACCTATAGTTGGAGAGACTTTGCAAATGCTAACTACAAGTGTGGACAACAGTGAGTATATGCGGAATGGAGACTT
CTTACCCACCCGGCTGCAGGCCCAGCAGGACGCTGTCAACATAGTTTGTCATTCAAAGACCCGCAGCAACCCCGAGAACA
ACGTGGGCCTTATCACACTGGCTAATGACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGTCGTATCCTGTCCAAG
CTGCACACTGTCCAACCCAAGGGCAAGATCACCTTCTGCACTGGTATCCGCGTGGCCCATCTGGCTCTGAAGCACCGACA
GGGCAAGAATCACAAGATGCGCATCATTGCCTTTGTGGGAAGCCCGGTGGAGGACAATGAGAAGGATCTGGTGAAACTGG
CTAAACGCCTCAAGAAGGAGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACA
GCCTTTGTAAACACGTTGAATGGCAAAGATGGAACCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAGCTTGGCTGA
TGCTCTCATCAGTTCTCCGATTTTGGCTGGCGAAGGTGGTGCCATGCTGGGTCTTGGTGCCAGTGACTTTGAATTTGGAG
TAGATCCCAGTGCTGATCCTGAGCTGGCCTTGGCCCTTCGTGTATCAATGGAAGAGCAGCGGCAGCGGCAGGAGGAGGAG
GCCCGGCGGGCAGCTGCAGCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACTGAAGACTCAGATGATGCCCTGCT
GAAGATGACCATCAGCCAGCAAGAGTTTGGCCGCACTGGGCTTCCTGACCTAAGCAGTATGACTGAGGAAGAGCAGATTG
CTTATGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCAGGCGGAATCAGCAGACATTGATGCCAGCTCAGCCATG
GACACATCTGAGCCAGCCAAGGAGGAGGATGATTACGACGTGATGCAGGACCCCGAGTTCCTTCAAAGTGTCCTAAAGAA
CCTCCCAGGTGTGGATCCCAACAATGAAGCCATTCGAAATGCTATGGGCTCCCTGGCCTCCCAGGCCACCAAGGACGGCA
AGAAGGACAAGAAAGAGGAAGACAAGAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 106 .11 RPM
SRP007412_brain_prefrontal_cortex 143 .75 RPM
SRP007412_cerebellum 79 .04 RPM
SRP007412_heart 105 .52 RPM
SRP007412_kidney 76 .64 RPM
SRP007412_liver 89 .34 RPM
SRP007412_testis 311 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000143398 ortholog_one2one 2 retrogenes
retro_hsap_3420, retro_hsap_716,
Nomascus leucogenys ENSNLEG00000010130 ortholog_one2one 2 retrogenes
retro_nleu_468, retro_nleu_5,
Otolemur garnettii ENSOGAG00000002846 ortholog_one2one 1 retrogene
retro_ogar_1855,
Pongo abelii ENSPPYG00000000872 ortholog_one2one 4 retrogenes
retro_pabe_3037, retro_pabe_3112, retro_pabe_59, retro_pabe_619,
Pan troglodytes ENSPTRG00000001282 ortholog_one2one 2 retrogenes
retro_ptro_2324, retro_ptro_511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1748 90.74 100.00
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Download FASTA sequences of all ENSMMUG00000005228 retrocopies