Parental gene:

SUPT20H, ENSMMUG00000003590

Aliases:None
Description:suppressor of Ty 20 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20596]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:17:16213445..16256109(-)


>ENSMMUG00000003590
CAGCAACAAGCTTTAGAACTAGCTTTGGATCGTGCAGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAA
ATACCTATCAAGTGGAAGAAAATCTGTATTTCAAAAACTTTATGACTTGTATATTGAAGAATGTGAAAAAGAACCTGAGG
TTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACTTTGTCATGTTTAGTGGTCAATCTG
TACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGAAAAAACGGATCAGATTCTGAGACCATTCGACTGCCCTATGA
AGAAGGAGAGTTGCTTGAATATTTGGATGCAGAAGAATTACCTCCTATTTTGGTCGATCTCCTAGAAAAATCTCAGGTTA
ATATTTTTCATTGCGGATGTGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAACATGAAATCTCCTGGTTACCAA
AGTCGGCACATTCTCTTACGTCCAACAATGCAGACTTTAATTTGTGATGTACATTCAATAACAAGTGATAACCATAAATG
GACCCAGGAAGACAAACTTCTGCTTGAGAGCCAGCTCATCCTAGCTACAGCTGAACCACTCTGTCTTGATCCTTCTATAG
CAGTCACCTGCACTGCAAACAGACTGCTCTATAACAAGCAAAAGATGAACACTCGCCCAATGAAACGGTGTTTCAAGCGG
TATTCCAGATCCTCTCTGAATCGGCAGCAAGATCTGTCTCATTGTCCACCTCCTCCTCAGCTGAGGTTACTTGATTTCTT
ACAAAAAAGAAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAAGCAGGAAATTGTGTAGATATGTGGA
AACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTAGATGTGGAGAAATATGCTAAAGTGGAAAAGTCTATCAAATCT
GATGACTCACAGCCAACAGTCTGGCCAGCCCATGACGTAAAAGATGATTATGTATTTGAATGTGAAACTGGTACTCAGTA
TCAGAAAACAAAGCTGACCATCTTGCAGTCGCTTGGAGATCCACTTTACTATGGTAAAATACAGCCATGTAAAGCAGATG
AAGAAAGTGACAGCCAGATGTCTCCATCACACTCCTCCACAGATGATCATTCAAATTGGTTCGTTATTGGATCAAAGACC
GATGCCGAGAGGGTAGTCAATCAGTACCAAGAATTAGTCCAGAATGAAGCCAAATGTCCGGTCAAGATGTCACACAGCTC
CAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGAACAAACTGAAACTGTGTCAGTTCAGTCTTCAG
TACTGGGGAAGGGCGTAAAACATCGACCCCCACCAATCAAACTGCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTAT
TTTACGCCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAA
ATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAAGAACCACGG
CCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGGGCCCAGGCTTTGATG
AGTGGTTCAAACCCCATGCTGGGCTGTAACACAGGTGCCATAACTCCTGCAGGAATAAACCTGAGCGGCCTTCTACCCTC
AGGAGGTCTGCTACCAAATGCATTGCCCAGTGCAATGCAGGCAGCTTCTCAAGCAGGTCAGAATGTTGGAAATAATAAC

Library Parental gene expression (RPM)
SRP007412_brain 33 .50 RPM
SRP007412_brain_prefrontal_cortex 26 .18 RPM
SRP007412_cerebellum 56 .50 RPM
SRP007412_heart 17 .67 RPM
SRP007412_kidney 38 .14 RPM
SRP007412_liver 13 .46 RPM
SRP007412_testis 126 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000000116 ortholog_one2one 2 retrogenes
retro_ecab_1052, retro_ecab_1101,
Homo sapiens ENSG00000102710 ortholog_one2one 2 retrogenes
retro_hsap_4659, retro_hsap_4794,
Loxodonta africana ENSLAFG00000027507 ortholog_one2many 1 retrogene
retro_lafr_1199,
Pongo abelii ENSPPYG00000005288 ortholog_one2one 2 retrogenes
retro_pabe_3619, retro_pabe_3729,
Pan troglodytes ENSPTRG00000005791 ortholog_one2one 2 retrogenes
retro_ptro_3095, retro_ptro_3189,
Pteropus vampyrus ENSPVAG00000014609 ortholog_one2one 1 retrogene
retro_pvam_401,
Tarsius syrichta ENSTSYG00000013227 ortholog_one2one 1 retrogene
retro_tsyr_2160,
Vicugna pacos ENSVPAG00000007288 ortholog_one2one 1 retrogene
retro_vpac_193,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2479 61.23 94.18
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2. retro_mmul_2555 57.86 92.87
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Download FASTA sequences of all ENSMMUG00000003590 retrocopies