Parental gene:

SPOPL, ENSMMUG00000002560

Aliases:None
Description:speckle-type POZ protein-like [Source:RefSeq peptide;Acc:NP_001253311]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:2002026..2024963(+)


>ENSMMUG00000002560
ATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATATGTCTACTGGTCCCATAGCAGAAAGCTGGTGTTACACACAGGT
TAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAGGAAATGGGTGAAGTGTTAAAAA
GTTCTACATTTTCATCTGGCCCAAGTGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTGTATTTGCTTTTAGTCAGCTGTCCCAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCT
GAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTGCAAGGGAAGGACTGGGGTTTTA
AAAAATTCATTAGAAGGGACTTTTTGCTTGACGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACCTTATTTTGTGAG
GTGAGTGTGGTCCAAGATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGC
AGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTGCTTGCAGCTCGATCCCCAGTTTTTAACGCCATGTTTGAACACGAAATGGAAGAAAGCAAAAAGAATCAA
GTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGGTTCATTTACACAGGGAGAGCACCAAACCTTGA
CAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGCGAAGAAGCTTTGT
GTAGTAACCTCTCAGTAGAGAATGTTGCGGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTGCGACAACTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGC
AACCGACATAATGGAAACATCGGGGTGGAAGTCCATGATTCAGTCTCACCCTCATTTAGTAGCAGAAGCCTTTCGAGCAC
TAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAACGGCTAAAACAGTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 25 .32 RPM
SRP007412_brain_prefrontal_cortex 14 .04 RPM
SRP007412_cerebellum 27 .70 RPM
SRP007412_heart 11 .25 RPM
SRP007412_kidney 9 .98 RPM
SRP007412_liver 3 .60 RPM
SRP007412_testis 5 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000014763 ortholog_one2one 1 retrogene
retro_dnov_546,
Homo sapiens ENSG00000144228 ortholog_one2one 2 retrogenes
retro_hsap_2943, retro_hsap_3048,
Gorilla gorilla ENSGGOG00000016285 ortholog_one2one 1 retrogene
retro_ggor_2040,
Nomascus leucogenys ENSNLEG00000013800 ortholog_one2one 1 retrogene
retro_nleu_1629,
Oryctolagus cuniculus ENSOCUG00000006944 ortholog_one2one 1 retrogene
retro_ocun_1842,
Pongo abelii ENSPPYG00000012825 ortholog_one2one 4 retrogenes
retro_pabe_2438, retro_pabe_2439, retro_pabe_2440, retro_pabe_2599,
Pan troglodytes ENSPTRG00000012504 ortholog_one2one 2 retrogenes
retro_ptro_1991, retro_ptro_2054,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1884 72.94 85.46
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2. retro_mmul_1885 80.00 77.30
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Download FASTA sequences of all ENSMMUG00000002560 retrocopies