Parental gene:

MAK16, ENSLACG00000018758

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH126583.1:4359465..4374345(+)


>ENSLACG00000018758
ATGCAGCACGACGATGTGATATGGGACATTATAGGAAACAAACAGTTTTGTTCCTTTAAAGTGAGAACAAAGACTCAAAG
CTTCTGCCGGAATGAGTATAACATTACAGGCCTGTGTAACCGTTCATCATGTCCCCTTGCCAACAGTCAGTATGCAACTG
TCAGAGAGGAGAAAGGCCAGTGTTACCTGTATATGAAGATGATAGAAAGGGCAGCATTTCCAGCCCGCTTGTGGGAAAGG
GTAAAGCTAAGTAAGAATTATGAAAAGGCGTTGGAACAGATTGATGAAAACCTAATTTACTGGCCACGCTTCATCAGACA
TAAATGCAAACAGCGGTTTACCAAAATCACACAGTATCTTATCAGAATAAGGAAGCTTACACTCAAACGACAGCGAAAAC
TTGTACCTTTAAGTAGGAAGGTTGAAAGAAGAGAAAAACGGAGAGAGGAAAAAGCTCTGGTTGCCGCTCAGTTGGACAAT
GCTATCGAGAAAGAGCTGCTGGAGAGGTTGAAACAAGGAGCATATGGCGATATCTACAATTTCCCAATCCATGCCTTTGA
TAAGGCTCTAGAGCGGCAAGATGAGGAGAGCGAAACAGATTCTTCTGAGGGGGAAGAGGAGGTGGAAGACGAGGACTCTG
GACAGAGAGAATTTGTTGAAGATGAAGAGATCGATGAGAGTGACATCAGTGACTTTGAGGACATGGATAAACTGAATGAG
CTCAGCAATGAAGAGCAATCTTCAAGTGCCGAGGAGGAGTCTGGGGACGAGGTAGAAGAGGAGAAAGAAGGCCATGCTGT
ATCAAAGTCTAAGGGCAAAACGCCCTTAAAAGGATCAATTAGGAAGAAACGAGCATATGTAGAAATGGAATATGAACAAG
AGACTGAACCAACAGCAAAGGCAAAAACAACATAA

Library Parental gene expression (RPM)
DRP000627_gill 4 .40 RPM
DRP000627_kidney 5 .63 RPM
DRP000627_pectoral_fin 5 .28 RPM
DRP000627_pelvic_fin 8 .60 RPM
DRP000627_pharynx 6 .01 RPM
DRP000627_tail_muscle 5 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009081 ortholog_one2one 5 retrogenes
retro_chof_2336, retro_chof_2538, retro_chof_531, retro_chof_867, retro_chof_948,
Dasypus novemcinctus ENSDNOG00000008424 ortholog_one2one 1 retrogene
retro_dnov_624,
Macropus eugenii ENSMEUG00000006945 ortholog_one2one 1 retrogene
retro_meug_1291,
Myotis lucifugus ENSMLUG00000002758 ortholog_one2one 1 retrogene
retro_mluc_590,
Oryctolagus cuniculus ENSOCUG00000008735 ortholog_one2one 3 retrogenes
retro_ocun_1053, retro_ocun_1298, retro_ocun_908,
Sus scrofa ENSSSCG00000015832 ortholog_one2one 1 retrogene
retro_sscr_917,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_67 100.00 100.00
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Download FASTA sequences of all ENSLACG00000018758 retrocopies