Parental gene: | CHAF1B, ENSG00000159259 |
| Aliases: | None |
| Description: | chromatin assembly factor 1, subunit B (p60) [Source:HGNC Symbol;Acc:1911] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 21:37757675..37789125(+) |
>ENSG00000159259
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTATTGTGGAAGGTGAATGATAACAAGGAGCCGGAGCAGATCGCTTTTCA
GGATGAGGACGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACAGTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAATAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTCCGTAGACTG
AGTTTCACTCCCGACGGATCTTTGCTTCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGATTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAACATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACTCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGTCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCCCGGAGAATAAACTTAACACCCTTAAAGAC
GGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGCCTGGAG
ACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAAGTCTGGACCCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 4 .15 RPM |
| bodymap2_adrenal | 5 .22 RPM |
| bodymap2_brain | 7 .90 RPM |
| bodymap2_breast | 3 .77 RPM |
| bodymap2_colon | 1 .10 RPM |
| bodymap2_heart | 0 .89 RPM |
| bodymap2_kidney | 0 .95 RPM |
| bodymap2_liver | 0 .25 RPM |
| bodymap2_lung | 1 .97 RPM |
| bodymap2_lymph_node | 0 .75 RPM |
| bodymap2_ovary | 3 .66 RPM |
| bodymap2_prostate | 2 .39 RPM |
| bodymap2_skeletal_muscle | 16 .95 RPM |
| bodymap2_testis | 8 .69 RPM |
| bodymap2_thyroid | 6 .21 RPM |
| bodymap2_white_blood_cells | 2 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000015726 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004429 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011403 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013891 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3504 | 84.40 | 69.59 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000159259 retrocopies