Parental gene: | ITCH, ENSFCAG00000008780 |
| Aliases: | None |
| Description: | itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:13890] |
| Organism: | Cat (Felis catus) |
| Coordinates: | A3:24443755..24584348(-) |
>ENSFCAG00000008780
ATGTCTGGCAGTGGATCGCAGCTTGGTTCAATGGGTAGCCTGACCATGAAATCACAGCTTCAGATCACTGTCATTTCAGC
AAAACTTAAAGAAAATAAAAAGAATTGGTTTGGACCAAGTCCTTATGTGGAAGTCACAGTTGATGGACAGTCAAAGAAGA
CAGAAAAATGCAACAATACGAACAGTCCCAAATGGAAGCAACCCCTTACAGTTATTGTCACCCCTGTGAGTAAATTGCAT
TTTCGCGTGTGGAGTCATCAGACACTGAAATCTGATGTTTTGTTGGGAACTGCTGCATTAGATATCTTTGAAACCTTAAA
GTCAAACAACATGAAACTTGAGGAAGTAGTTGTGACTTTACAGCTTGTAGGTGACAAAGAGCCAACAGAGACAATGGGAG
ACTTGTCAGTTTGTCTTGATGGGCTGCAGTTAGAGCCTGAAGTTGTTACCAATGGTGAAACTACATGTTCAGAAAGTGCT
TCACAGAATGATGATGGCTCTAGACCGAAGGATGAAGCAAGAACAAATCCAAATGGATCAGATGAACCTGAGGATTCAGG
GGCTGGTGAAAATAGGAAGGTCAATGGGAATAATTCTCCATCACTCTCAAATGGCGGTTTTAAACCTTCTAGGCCTCCAA
GACCTTCACGACCACCTCCACCTACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCTACTTCTGAAAGTGAT
GGATCCAGTACAGGCTCTCTGCCACCAACAAATATAAATTCAAATACATCTGAAGGAGCAACATCTGGATTAATAATTCC
TCTTACTATATCTGGAGGCTCAGGCCCTAGGCCATTAAATACTGTACCTCAAGCTCCCCTACCACCTGGTTGGGAGCAGA
GAGTGGACCAGCATGGGCGAGTTTACTACGTAGATCATATTGAAAAAAGAACAACGTGGGATAGACCAGAACCTCTACCT
CCTGGCTGGGAACGGCGGGTTGACAACATGGGACGTATTTATTATGTTGACCATTTCACAAGAACAACAACGTGGCAGAG
GCCGACATTGGAATCTGTCCGGAACTATGAACAGTGGCAACTCCAACGTAGTCAGCTTCAAGGAGCAATGCAGCAATTTA
ACCAGAGATTCATTTATGGGAATCAGGATTTGTTTACTACATCGCAAAATAAAGAATTTGATCCCCTTGGTCCCCTGCCT
CCTGGATGGGAGAAGAGAACAGACAGCAATGGTAGAGTATATTTTGTCAACCACAACACTCGTATTACACAATGGGAGGA
CCCCAGAAGTCAAGGTCAATTAAATGAAAAGCCCTTACCTGAAGGCTGGGAAATGAGATTCACAGTAGATGGAATTCCAT
ATTTTGTGGACCACAATAGAAGAACAACCACCTATATTGATCCCCGCACTGGAAAATCTGCTCTAGACAATGGACCACAG
ATAGCCTACGTACGGGACTTCAAGGCAAAGGTTCAGTATTTCCGCTTCTGGTGTCAGCAACTGGCAATGCCACAGCACAT
AAAGATTACAGTGACAAGAAAAACATTGTTTGAAGATTCCTTTCAGCAGATAATGAGCTTCAATCCCCAAGATCTGCGAA
GACGTTTGTGGGTGATTTTTCCAGGAGAAGAAGGTTTAGATTATGGAGGTGTAGCAAGAGAGTGGTTCTTTCTTTTGTCA
CACGAGGTGTTGAACCCCATGTATTGCCTGTTTGAATATGCAGGAAAGGATAACTACTGCCTGCAGATTAATCCTGCTTC
TTACATCAATCCAGATCACCTGAAATATTTTCGTTTTATTGGCAGGTTTATTGCCATGGCTTTGTTCCATGGGAAATTCA
TAGACACAGGTTTTTCTTTGCCATTCTATAAGCGTATATTGAACAAACCAGTTGGACTCAAGGATTTAGAATCTATTGAT
CCAGAATTTTACAATTCTCTCATCTGGGTTAAAGAAAACAATATTGAGGAATGTGGTTTGGAAATGTACTTCTCTGTCGA
TAAAGAAATTTTAGGTGAAATCAAGAGTCATGATTTGAAACCTAATGGTGGCAATATTCTTGTGACAGAAGAAAATAAAG
AGGAATATATCAGAATGGTAGCTGAATGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGCTTTCTTTGAGGGCTTT
AATGAAATTCTTCCCCAGCAGTATTTGCAATACTTTGATGCAAAGGAATTAGAGGTCCTTTTATGTGGAATGCAAGAGAT
TGATTTGAATGACTGGCAAAGACATGCCATCTACCGTCATTACACTAGGACAAGCAAACAAATCATGTGGTTTTGGCAGT
TTGTTAAAGAAATTGATAATGAGAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAACTTGTCGATTGCCAGTTGGAGGA
TTTGCTGACCTCATGGGGAGCAATGGACCACAGAAATTCTGCATTGAAAAAGTTGGGAAAGAAAACTGGTTACCCAGAAG
TCATACCTGTTTTAACCGCCTGGACCTGCCACCCTACAAGAGCTATGAGCAACTGAAGGAAAAGCTGTTATTTGCCATTG
AAGAAACAGAAGGATTTGGACAAGAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 41 .78 RPM |
| SRP017611_kidney | 24 .94 RPM |
| SRP017611_liver | 24 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000000308 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011115 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_899 | 87.99 | 62.76 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSFCAG00000008780 retrocopies