Parental gene: | PPP2CB, ENSETEG00000018123 |
| Aliases: | None |
| Description: | protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_1678:11308..75343(-) |
>ENSETEG00000018123
ATGGACGACAAGGCGTTCACCAAGGAGCTAGACCAGTGGGTCGAGCAGCTGAACGAGTGTAAACAGCTTAACGAGAACCA
AGTACGGACGCTGTGCGAAAAGGCTAAGGAAATTTTAACAAAGGAATCAAATGTGCAAGAGGTCCGTTGCCCTGTGACCG
TTTGTGGAGATGTTCATGGTCAGTTCCATGACCTTATGGAACTCTTCAGAATTGGTGGGAAATCACCAGATACAAACTAT
CTATTCATGGGCGACTACGTAGACAGAGGTTATTATTCTGTGGAGACTGTGACTCTTCTTGTGGCATTAAAGGTGCGTTA
TCCAGAACGCATTACAATATTAAGAGGAAACCACGAAAGCCGACAAATTACTCAAGTATATGGCTTTTATGATGAATGTC
TACGAAAATATGGAAATGCTAATGTTTGGAAATATTTTACAGATCTATTTGATTATCTTCCACTGACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATTGATACACTGGATCATATAAGAGCCCTGGATCGATTACA
AGAAGTTCCACATGAGGGTCCAATGTGTGATCTATTATGGTCAGATCCAGATGATCGCGGTGGGTGGGGTATTTCTCCAC
GTGGTGCTGGCTACACATTTGGACAAGACATTTCTGAAACATTTAACCATGCCAATGGTCTCACACTGGTTTCTCGTGCT
CACCAGCTTGTGATGGAGGGATATAATTGGTGTCATGATCGGAATGTGGTTACCATTTTCAGTGCACCCAATTATTGTTA
TCGCTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTAAAATATTCCTTCCTTCAGTTTGACCCAGCACCTC
GTCGTGGAGAGCCTCATGTGACTCGGCGTACCCCTGACTACTTCCTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001615 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000009245 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010906 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007561 | within_species_paralog | 2 retrogenes | |
| Felis catus | ENSFCAG00000025139 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019001 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002488 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000102 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_680 | 84.38 | 81.88 | Please wait, loading  |
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| 2. | retro_etel_702 | 96.23 | 85.76 | Please wait, loading |
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| 3. | retro_etel_1607 | 86.15 | 63.11 | Please wait, loading |
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| 4. | retro_etel_1923 | 73.33 | 57.61 | Please wait, loading |
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Download FASTA sequences of all ENSETEG00000018123 retrocopies