Parental gene:

TUBA4A, ENSETEG00000010296

Aliases:None
Description:tubulin, alpha 4a [Source:HGNC Symbol;Acc:12407]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_8024:134320..138368(-)


>ENSETEG00000010296
ATGCGTGAATGCATCTCAGTCCACGTGGGGCAGGCAGGTGTCCAGATGGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACATGGGATTCAGCCTGATGGGCAGATGCCCAGCGACAAAACCATTGGTGGGGGAGACGACTCCTTCACCACCTTCTTCT
GTGAAACGGGAGCTGGGAAGCACGTGCCCCGGGCCGTATTTGTGGACCTGGAGCCCACAGTGATCGATGAGATCCGCAAT
GGCCCATACCGCCAGCTATTCCATCCAGAGCAGCTCATCACCGGCAAGGAGGACGCTGCTAACAACTATGCCCGTGGCCA
CTATACCATCGGCAAGGAGATCATCGATCCGGTGCTGGACCGGATCCGCAAGCTGTCCGACCAGTGCACGGGGCTCCAGG
GCTTCCTCGTCTTCCACAGCTTTGGTGGGGGCACGGGCTCGGGCTTCACCTCCCTGCTGATGGAGCGGCTCTCTGTGGAC
TACGGCAAGAAGTCCAAGCTGGAGTTCTCCATCTACCCAGCCCCCCAGGTCTCCACGGCCGTGGTCGAGCCCTACAACTC
CATCCTGACCAACCACACCACCCTGGAGCACTCCGACTGCGCCTTCATGGTGGACAACGAGGCCATCTATGACATCGGCC
GCAGCAACCTGGACATCGAGCGCCCCACCTACACCAACCTCAACCGCCTCATCAGCCAAATCGTGTCCTCCATCACGGCT
TCCCTGCGCTTCGATGGAGCCCTCAATGTGGACCTGACTGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTT
CCCCCTGGCCACCTATGCACCCGTCATCTCTGCTGAGAAGGCCTACCACGAGCAGCTGTCTGTGGCCGAGATCACCAACG
CCTGCTTCGAGCCCGCCAACCAGATGGTGAAGTGCGACCCCCGCCATGGCAAGTACATGGCCTGCTGCCTGCTGTACCGT
GGAGACGTGGTGCCCAAGGATGTCAACGCTGCCATCGCCGCCATCAAGACCAAGCGCAGTATCCAGTTTGTGGACTGGTG
CCCGACGGGCTTTAAGGTTGGCATCAACTACCAGCCACCCACTGTGGTGCCTGGGGGTGACCTGGCGAAGGTGCAGCGTG
CTGTGTGCATGCTGAGCAACACAACCGCCATCGCCGAGGCCTGGGAGCGCCTGGACCACAAGTTTGACCTGATGTATGCC
AAGCGGCCGTTCGTGCACTGGTATGTGGGTGACGGCATGGAAGAGCGCAAGTTCTCTGAGGGCCGAGAGGATATGGCTGC
CCTGGAGAAGGATTACGAGGAGGTGGGCATGGACTCCTACGAGGACGAGGATGAGGGAGAAGAATAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Dipodomys ordii ENSDORG00000000154 ortholog_one2one 3 retrogenes
retro_dord_460, retro_dord_564, retro_dord_786,
Felis catus ENSFCAG00000027277 ortholog_one2one 1 retrogene
retro_fcat_596,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Macropus eugenii ENSMEUG00000010779 possible_ortholog 2 retrogenes
retro_meug_1648, retro_meug_2174,
Microcebus murinus ENSMICG00000000804 ortholog_one2one 1 retrogene
retro_mmur_103,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Pteropus vampyrus ENSPVAG00000010798 ortholog_one2one 1 retrogene
retro_pvam_1019,
Rattus norvegicus ENSRNOG00000003597 ortholog_one2one 1 retrogene
retro_rnor_2819,
Ictidomys tridecemlineatus ENSSTOG00000019497 ortholog_one2one 1 retrogene
retro_itri_203,
Tursiops truncatus ENSTTRG00000010042 ortholog_one2one 1 retrogene
retro_ttru_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_1816 82.57 91.52
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2. retro_etel_1993 70.61 61.38
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Download FASTA sequences of all ENSETEG00000010296 retrocopies