Parental gene:

NT5C3B, ENSEEUG00000013493

Aliases:None
Description:5'-nucleotidase, cytosolic IIIB [Source:HGNC Symbol;Acc:28300]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_4522:28928..38873(-)


>ENSEEUG00000013493
CTCCAAGCACTCCTTCACCACTATTACCCAATTGAGATTGACCCACAGCGAAGCATCAAAGAGAAGTTACCTCATATGGT
GGAATGGTGGACTAAAGCACACAACCTCCTGTGTCAGCAGAAGATTCAGAAGTTCCAGATTGCCCAGATGGTTCGAGAAT
CCAGTGTGATGCTCAGGGAAGGATACAAGGCATTTTTCAACACTCTCTACCAAAACAATATTCCCCTTTTCATCTTTTCT
GCTGGTGTTGGTGATGTCCTGGAAGAAATTATCAGACAGATGAAAGTGTTCCACTCCAACATCCATATCGTGTCTAACTA
CATGGATTTTGATGAAGATGGTATCCTACAGGGATTCAAAGGCCAGCTCATACACACATACAATAAGAACAGCTCCGTGT
GTGAGAATTCTGGATACTTTCAGCAGCTCCAGGGCAAAACCAACATCCTCCTGCTGGGAGACTCCATGGGGGACCTCACT
ATGGCTGATGGAGTTCCTAATGTAGAGAACATTCTCAGGGTCGGCTTCCTAAACGACAAGGTGGAGGAGCGGCGGGAGCG
CTACATGGACTCCTATGACATCGTTCTGGAGAAGGATGAGACGCTGGACGTGGTCAACGGGCTGCTGCAGCACATCCTGC
GCCTGGGAGATGAACTGGAAGTGCAGGGCTCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 69 .78 RPM
SRP017611_kidney 40 .70 RPM
SRP017611_liver 14 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005754 ortholog_one2one 1 retrogene
retro_amel_1542,
Felis catus ENSFCAG00000023499 ortholog_one2one 1 retrogene
retro_fcat_1017,
Mustela putorius furo ENSMPUG00000010759 ortholog_one2one 2 retrogenes
retro_mputfur_1354, retro_mputfur_1594,
Pan troglodytes ENSPTRG00000009181 ortholog_one2one 1 retrogene
retro_ptro_2082,
Pteropus vampyrus ENSPVAG00000010634 ortholog_one2one 1 retrogene
retro_pvam_233,
Sorex araneus ENSSARG00000006434 ortholog_one2one 1 retrogene
retro_sara_505,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_413 54.47 54.91
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Download FASTA sequences of all ENSEEUG00000013493 retrocopies