Parental gene:

LSM12, ENSEEUG00000002419

Aliases:None
Description:LSM12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26407]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_4487:45045..68025(-)


>ENSEEUG00000002419
TGTCCCTCTTCCAGTGGAAAGCCCAACCATGCAGACATCTTGCTCATTAATTTACAGTATGTTTCAGAAGTGGAAATTAT
TAATGACCGAACGGAAACCCCTCCTCCCCTAGCTTCACTCAATGTTAGTAAGCTTGCCAGCAAAGCACGGACAGAGAAGG
AGGAGAAGCTGAGCCAGGCCTATGCAATCAGCGCCGGTGTCTCCCTTGAGGGCCAGCAGCTTTTCCAGACCATTCACAAG
ACCATTAAAGATTGTAAATGGCAAGAAAAGAACATTGTAGTCATGGAAGAAGTTGTTATTACACCCCCATATCAAGTGGA
AAACTGTAAAGGCAAAGAGGGGAGTGCACTGAGCCATGTACGAAAAATAGTTGAAAAACATTTTAGAGACGTGGAAAGCC
TAAAGATAATGCAGCGTTCACAAGCCCAGCAACCACAGAAGGAGGCTGCTCTGTCATCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 2 .58 RPM
SRP017611_kidney 3 .94 RPM
SRP017611_liver 1 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001198 ortholog_one2one 1 retrogene
retro_chof_1429,
Dipodomys ordii ENSDORG00000016381 ortholog_one2one 1 retrogene
retro_dord_596,
Echinops telfairi ENSETEG00000008374 possible_ortholog 1 retrogene
retro_etel_21,
Macropus eugenii ENSMEUG00000007501 ortholog_one2one 1 retrogene
retro_meug_1462,
Myotis lucifugus ENSMLUG00000006391 ortholog_one2one 1 retrogene
retro_mluc_2205,
Macaca mulatta ENSMMUG00000006804 possible_ortholog 1 retrogene
retro_mmul_3,
Oryzias latipes ENSORLG00000011310 ortholog_one2many 1 retrogene
retro_olat_12,
Pteropus vampyrus ENSPVAG00000013706 ortholog_one2one 1 retrogene
retro_pvam_172,
Tupaia belangeri ENSTBEG00000012523 possible_ortholog 2 retrogenes
retro_tbel_3062, retro_tbel_60,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_603 99.35 100.00
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Download FASTA sequences of all ENSEEUG00000002419 retrocopies