Parental gene:

AGPAT2, ENSECAG00000010932

Aliases:None
Description:1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:325]
Organism:Horse (Equus caballus)
Coordinates:25:37308422..37312433(+)


>ENSECAG00000010932
CTTAGCATCATCAGTTGGTTTGTTCGGTCCTTCAAGTACGCATACGGCCTTCGCTTTGAGATAAAGGGCCGCGGGAAGCT
GGAAGTCGACCACCCCTGTGTCATCATTTCTAACCACCAGAGCATCCTGGACATGATGGGCCTCATGGAGATCCTGCCCC
CGCGCTGCATTCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCCTGGGCCTGATCATGTACCTCGGGGGCGTCGTC
TTCATCAACCGGCAGCGCTCCAGTACCGCCATGACCGTGATGGCTGATGTGGGCGAGCACTTGGTCCGGGAGGATCTCAA
AGTGTGGATCTACCCTGAGGGCACGCGGAATGACAATGGAGACCTGCTACCTTTCAAGAAAGGCGCCTTCCACCTGGCAA
TCCAGGCCCAGGTGCCCATCATCCCCGTGGTGTACTCCAGCTTCTCCTCCTTCTACAACTCCAGGACGAAGCTCTTCACC
TCAGGAACGGTCAAGGTAGAGGTGCTGGATGCCATCCCCACCAGAGGCCTCACTGTCACTGACGTCCCCAAGCTCATGGA
CACCTGCCACCAGGCCATGAGGACCACGTTCTTCCGCATATCCAAGATGCCCCAGGAGAATGGGGATGCCGTGGGGCCTG
GCGCCCAGCCAGCCCAGTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 97 .64 RPM
SRP021940_cerebellum 4 .36 RPM
SRP021940_embryo 15 .50 RPM
SRP021940_placental_villous 124 .80 RPM
SRP021940_synovial_membrane 25 .39 RPM
SRP021940_testis 38 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003965 ortholog_one2one 1 retrogene
retro_amel_982,
Canis familiaris ENSCAFG00000019569 ortholog_one2one 1 retrogene
retro_cfam_1838,
Felis catus ENSFCAG00000011607 ortholog_one2one 1 retrogene
retro_fcat_1778,
Mustela putorius furo ENSMPUG00000011249 ortholog_one2one 1 retrogene
retro_mputfur_1160,
Ochotona princeps ENSOPRG00000003291 ortholog_one2one 1 retrogene
retro_opri_578,
Ictidomys tridecemlineatus ENSSTOG00000023422 possible_ortholog 1 retrogene
retro_itri_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_825 71.43 78.08
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Download FASTA sequences of all ENSECAG00000010932 retrocopies