Parental gene:

VAPB, ENSDNOG00000012711

Aliases:None
Description:VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:HGNC Symbol;Acc:12649]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_2848:15662..99903(+)


>ENSDNOG00000012711
ATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCACAGCACGAGCTCAAATTCCGAGGTCCCTTCACTGATGTTGTCAC
CACCAACCTAAAGCTTGGCAACCCAACAGACCGAAATGTGTGTTTTAAAGTGAAGACCACGGCACCGCGTAGGTACTGCG
TGAGGCCCAACAGTGGGATCATTGATGCAGGGACATCCATTAATGTATCTGTGATGTTACAGCCTTTCGATTATGATCCC
GAGAAAAGTCACAAGTTTATGGTTCAGTCTATGTTTGCTCCAACTGACACTTCTGATATGGAGGCAGTATGGAAGGAGGC
AAAACCGGAAGACCTTATGGATTCAAAACTTAGATGTGTGTTTGAATTGCCAGCAGAAAATGATAAACCACATGATGTAG
AAATAAATAAAATTATAACCACATCTGCATCAAAGACAGAAACACCAACAATGTCTAAATCTCTGAGTTCTTCTTTGGAT
GACACTGAAGTTAAGAAAGTGATGGAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGAGAACAAACA
ATTCAAGGAAGAAGATGGACTTCGGATGAGGAAGACAGTGCAGAGCAACAGCCCTGTATCTGCATTGGCCACAGCTGGGA
AGGAAGAAGGTCTCCGCACCCGGCTACTCGCTCTAGTGGTCTTGTTCTTTATTGTTGGTGTAATTATAGGGAAAATCGCC
TTGTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 38 .70 RPM
SRP012922_cerebellum 28 .32 RPM
SRP012922_heart 20 .19 RPM
SRP012922_kidney 24 .92 RPM
SRP012922_liver 19 .51 RPM
SRP012922_lung 23 .83 RPM
SRP012922_quadricep_muscle 27 .52 RPM
SRP012922_spleen 23 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017424 ortholog_one2one 1 retrogene
retro_btau_1010,
Macropus eugenii ENSMEUG00000009788 ortholog_one2one 1 retrogene
retro_meug_842,
Monodelphis domestica ENSMODG00000016549 ortholog_one2one 1 retrogene
retro_mdom_919,
Nomascus leucogenys ENSNLEG00000009351 ortholog_one2many 1 retrogene
retro_nleu_55,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_206 87.73 66.80
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Download FASTA sequences of all ENSDNOG00000012711 retrocopies