Parental gene:

SPCS1, ENSDNOG00000012421

Aliases:None
Description:signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23401]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_5494:223720..224577(+)


>ENSDNOG00000012421
GATTACAAGGGCCAGAAGCTAGCTGAACAGATGTTTCAGGGAATTATTCTGTTTTCCGCAATAGTTGGATTTATCTACGG
GTACGTGGCCGAACAGTTCGGATGGACTGTCTATATAGTTATGGCCGGATTTGCTTTTTCATGTTTGCTGACACTTCCTC
CATGGCCCATCTATCGCCGACATCCCCTCAAGTTACCCGTTCAAGACTCAGGAACAGAAGACAAGAAACCAGGAGATAGA
AAACTTAAGAGGCATGCTAAAAATAATTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 39 .28 RPM
SRP012922_cerebellum 17 .46 RPM
SRP012922_heart 25 .99 RPM
SRP012922_kidney 23 .27 RPM
SRP012922_liver 26 .94 RPM
SRP012922_lung 29 .48 RPM
SRP012922_quadricep_muscle 34 .79 RPM
SRP012922_spleen 38 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000000678 ortholog_one2one 4 retrogenes
retro_dord_273, retro_dord_274, retro_dord_686, retro_dord_734,
Equus caballus ENSECAG00000023559 possible_ortholog 1 retrogene
retro_ecab_86,
Erinaceus europaeus ENSEEUG00000007914 ortholog_one2one 1 retrogene
retro_eeur_25,
Echinops telfairi ENSETEG00000004020 ortholog_one2one 1 retrogene
retro_etel_1056,
Loxodonta africana ENSLAFG00000016073 ortholog_one2one 2 retrogenes
retro_lafr_575, retro_lafr_625,
Mus musculus ENSMUSG00000021917 ortholog_one2one 2 retrogenes
retro_mmus_2758, retro_mmus_2928,
Vicugna pacos ENSVPAG00000007380 ortholog_one2one 1 retrogene
retro_vpac_269,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_698 87.78 100.00
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2. retro_dnov_2086 93.33 100.00
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3. retro_dnov_2245 92.31 100.00
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Download FASTA sequences of all ENSDNOG00000012421 retrocopies