Parental gene:

VIMP, ENSDNOG00000010694

Aliases:None
Description:VCP-interacting membrane protein [Source:HGNC Symbol;Acc:30396]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2920:538..10047(-)


>ENSDNOG00000010694
ATGGAGCGGGATGGGGAGTTACTGTCCACGCGGCCGGCCTTTGAGACTGAGGGTCTGCGCTTCCTGCACGTCACCGTGGG
TTCTCTGCTGGCCACCTATGGCTGGTACATCGTCTTTAGCTGTGTCCTCCTCTACGTGGTCTTTCAGAAGCTTTCCACCC
GGCTGAGGGCCTTGAGGCAGAGGCAGCTGGATCGAGCAGCAGCGGCTGTGGAACCTGATATTGTTGTTAAACGACAAGAA
GCTGTAGCAGCTGCTCGTTTGAAAATGCAAGAAGAATTAAACGCACAAGCTGAAAAGCATAAGGAAAAACTAAAACAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTTATAACCCCTTGTCTGGTGAAGGAGGTGGGACTTGTTCCTGGAGACCTGGACGCAGAGGCCCGTCAGCTGGTGG
ATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .98 RPM
SRP012922_cerebellum 19 .25 RPM
SRP012922_heart 22 .04 RPM
SRP012922_kidney 16 .15 RPM
SRP012922_liver 22 .14 RPM
SRP012922_lung 32 .38 RPM
SRP012922_quadricep_muscle 17 .48 RPM
SRP012922_spleen 35 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007115 ortholog_one2one 1 retrogene
retro_amel_177,
Bos taurus ENSBTAG00000000640 ortholog_one2one 1 retrogene
retro_btau_1044,
Echinops telfairi ENSETEG00000011401 ortholog_one2one 1 retrogene
retro_etel_2096,
Felis catus ENSFCAG00000028822 ortholog_one2one 1 retrogene
retro_fcat_1524,
Pteropus vampyrus ENSPVAG00000012873 ortholog_one2one 1 retrogene
retro_pvam_1334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_207 77.00 53.48
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2. retro_dnov_880 77.00 53.48
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Download FASTA sequences of all ENSDNOG00000010694 retrocopies