Parental gene: | PRPSAP1, ENSDNOG00000003550 |
| Aliases: | None |
| Description: | phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:HGNC Symbol;Acc:9466] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6493:48536..64028(-) |
>ENSDNOG00000003550
ATGAACGCCGCCCGCACCGGCTACCGAGTCTTCTCGGCCAACTCCACGGCCGCCTGCACCGAGCTGGCCAAGCGCATCAC
CGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACAAGAGTTGAAATAAAAGAAT
CTGTGCGTGGCCAGGATATTTTCATTATCCAGACAATACCCAGAGATGTGAACACAGCTGTGATGGAGTTACTGATCATG
GCGTACGCCCTGAAAACAGCCTGTGCCAGGAATATTATCGGCGTCATCCCGTATTTCCCCTACAGCAAACAAAGCAAGAT
GAGGAAGCGGGGCTCCATCGTGTGCAAGCTCCTGGCGTCCATGCTGGCCAAAGCAGGTTTAACTCACATTATCACTATGG
ATCTTCATCAAAAGGAAATACAAGGCTTTTTCAGCTTTCCCGTGGACAACCTTAGAGCCTCACCTTTCCTGCTTCAGTAT
ATCCAGGAAGAAATTCCAAATTATAGAAATGCAGTCATTGTTGCCAAGTCTCCTGATGCTGCAAAAAGGGCCCAGTCCTA
TGCGGAGAGGCTGCGCCTGGGCTTGGCTGTCATCCACGGGGAGGCGCAGTGCGCAGAGCTGGACATGGACGACGGCCGCC
ATTCTCCTCCAATGGTCAAAAATGCAACTGTGCACCCGGGCCTGGAGCTGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGACATCATTGATGACGTGGAAAGTTTTGTGGC
TGCTGCAGAGATCCTGAAAGAGAGAGGTGCCTACAAGATCTATGTTATGGCCACTCACGGCATCCTGTCTGCAGACGCCC
CCCGCCTCATCGAGGAGTCTTCCATTGATGAGGTGGTGGTGACCAACACCGTTCCTCATGAGGTGCAGAAGCTGCAGTGT
CCCAAGATAAAGACCGTGGACATCAGCTTGATTCTTTCTGAAGCAATTCGGAGGATCCACAACGGAGAGTCCATGGCTTA
CCTCTTCCGAAACATCACTGTGGATGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 75 .84 RPM |
| SRP012922_cerebellum | 23 .09 RPM |
| SRP012922_heart | 7 .19 RPM |
| SRP012922_kidney | 35 .59 RPM |
| SRP012922_liver | 33 .44 RPM |
| SRP012922_lung | 78 .96 RPM |
| SRP012922_quadricep_muscle | 5 .54 RPM |
| SRP012922_spleen | 30 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000002028 | within_species_paralog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000009171 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_280 | 58.92 | 50.84 | Please wait, loading  |
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Download FASTA sequences of all ENSDNOG00000003550 retrocopies