Parental gene:

ERGIC2, ENSCPOG00000015668

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_54:6353701..6384292(+)


>ENSCPOG00000015668
ATGAGGCGACTGAATCGGAAGAAAACCTTAAATTTGGTGAAAGAGTTGGATGCCTTTCCAAAGGTTCCTCAGAGCTATGT
GGAGACTTCAGCCAGTGGGGGTACAGCAGTTTCTCTAATAGCATTTACCACTATGGCTTTATTAACAATAATGGAATTCT
CAGTGTATCAAGACACATGGATGAAGTATGAATATGAAGTAGACAAGGATTTTTCTAGTAAATTGAGAATCAACATAGAT
ATCACCGTTGCCATGAAGTGCCAGTATGTTGGAGCAGATGTATTGGATGTAGCAGAAACAATGGTTGCATCTGCAGATGG
TCTAGTTTATGAACCAGCAATATTTGATCTCTCACCACAGCAAAAAGAATGGCAGAGGATGTTGCAGTTGATTCAGAGTA
GACTTCAAGAAGAGCATTCTCTTCAAGATGTGATATTTAAAAGTGCTTTTAAAAGTGCATCAACAGCACTTCCACCAAGG
GAAGCCAATTCATCGCAGTCTCCAGATGCATGCCGAATTCACGGTCACCTCTATGTTAATAAAGTAGCTGGAAATTTTCA
CATAACTGTGGGCAAGGCAATTCCACATCCTCGGGGTCATGCACACTTGGCAGCACTTGTCAACCATGACTCTTACAACT
TTTCTCACAGAATAGATCATTTATCTTTTGGAGAACTTGTTCCAGGAATTATTAATCCTTTAGATGGAACTGAAAAAATT
GCTGTAGATCACAACCAGATGTTCCAATATTTTATTACAGTTGTGCCAACAAAATTACATACATACAAAATTTCAGCAGA
CACACATCAGTTTTCTGTGACAGAAAGGGAGCGAATCATCAACCATGCTGCAGGCAGCCATGGGGTCTCGGGGATATTTA
TGAAGTACGACCTCAGTTCTCTTATGGTGACAGTGACTGAGGAACACATGCCATTCTGGCAGTTTTTTGTAAGACTCTGT
GGTATTGTTGGAGGAATCTTCTCTACAACAGGCATGTTACATGGAATTGGAAAATTTATAGTAGAAATAATTTGCTGTCG
TTTCAGACTTGGAGCCTATAAACCTGTACATTCTGTCCCCTGTGAGGATGGGCACACAGACAACCACTTACCTCTTTTAG
AAAACAGTACACATTAG

Library Parental gene expression (RPM)
SRP017611_brain 18 .58 RPM
SRP017611_kidney 19 .47 RPM
SRP017611_liver 34 .86 RPM
SRP040447_lung 21 .74 RPM
SRP040447_skeletal_muscle 23 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Ornithorhynchus anatinus ENSOANG00000010582 ortholog_one2one 1 retrogene
retro_oana_32,
Oryctolagus cuniculus ENSOCUG00000017255 ortholog_one2one 1 retrogene
retro_ocun_1540,
Pongo abelii ENSPPYG00000004390 ortholog_one2one 1 retrogene
retro_pabe_657,
Rattus norvegicus ENSRNOG00000001852 ortholog_one2one 1 retrogene
retro_rnor_1557,
Sarcophilus harrisii ENSSHAG00000004822 ortholog_one2one 1 retrogene
retro_shar_386,
Tupaia belangeri ENSTBEG00000011223 ortholog_one2one 1 retrogene
retro_tbel_3783,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_824 84.12 88.89
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Download FASTA sequences of all ENSCPOG00000015668 retrocopies