Parental gene:

SPC25, ENSCPOG00000005926

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:20385283..20400340(+)


>ENSCPOG00000005926
ATGGTAGAGGATGAACTGGCGCTCTTCGATAAAAGCATAAATGAATTTGGAAATAAGTTCAGAAACACTCTCAGTGACAC
CCCCTGTCAGATGTTGGGGCTAAGAGATGCCTGTAAGGACTCCATTAAAACCCTAGCAGAAAAGCTGTCAGTGAAATTAA
AGGAAGAAGAAAAAATGGTTGAGATGTTTCTGGAATATCAAAATCAGGTCTGCAAGCAGAACAAGCTGATTCAAGAAAAG
AAAGATAATCTTTTAAAGTTGATTGCTGAAGTGAAAGGCAAAACACAGGAAATGGAAGTCTTAACTGCAAACATTCAGGA
TCTTAAAGAAGAATATTCTAGGAAGAGAGAAACTATTTCCACTGCTAACAAAGCTAATGAAGAAAGGTTAAAAAGGCTGC
AGAAGTCAGCAGACTTGTATAAAGATCGGCTTGGACTAGAAATTAGAAAAATTTATGGGGATAAACTGCAGTTTATATTT
ACTAATATCGACTCTAAGCATCCTGAAAACCCATTTATGTTTTCTTTGCGTCTCAATGAAGCGGGGGACTATGAAGTGTC
AGATAGTGCTCCTCATCTTGAGTGCCTAGCAGAATTTCAAGAGAATGTAAGGAAGACCAACAATTTTTCAGCTTTTCTTG
CCAATGTTCGGAAAGCTTTTACCGCTACGGTTTATAAT

Library Parental gene expression (RPM)
SRP017611_brain 0 .12 RPM
SRP017611_kidney 0 .63 RPM
SRP017611_liver 1 .04 RPM
SRP040447_lung 3 .46 RPM
SRP040447_skeletal_muscle 0 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013303 ortholog_one2one 4 retrogenes
retro_chof_1070, retro_chof_1541, retro_chof_2326, retro_chof_744,
Dasypus novemcinctus ENSDNOG00000004429 ortholog_one2one 1 retrogene
retro_dnov_826,
Echinops telfairi ENSETEG00000015642 ortholog_one2one 1 retrogene
retro_etel_1554,
Loxodonta africana ENSLAFG00000004668 ortholog_one2one 1 retrogene
retro_lafr_497,
Monodelphis domestica ENSMODG00000007753 ortholog_one2one 1 retrogene
retro_mdom_1828,
Tupaia belangeri ENSTBEG00000012559 ortholog_one2one 1 retrogene
retro_tbel_2798,
Tursiops truncatus ENSTTRG00000006112 ortholog_one2one 1 retrogene
retro_ttru_574,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1032 66.81 100.00
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Download FASTA sequences of all ENSCPOG00000005926 retrocopies