Parental gene:

FBXO27, ENSCPOG00000004611

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_52:12521948..12524691(-)


>ENSCPOG00000004611
ATGGTGCAGCACGGTGGAGATGGCTGGGTGGTGGAAAACAACATGACAACCGTGCCTGGGGCCCCTTCGCAGACCTGCTT
TGTAGCCTCCTTCAGTTGGTGTCGGAAGAAGCAGGTCTTGGATCTGGAGGAGGAGGGCCTATGGCCAGAACTGCTGGACA
GTGGCAAGATTGAAATCCATGTCTCAGACTGGTGGGGAGCCCGACATGACAGTGGCTGTAGGTATCGACTGCTTGTCCAA
CTTCTAGATGCCGGCCAGACTGTCCTAGATAAATTCTCTGCTGTGCCTGATCCCATTGAACAATGGAACAACAATGTCTG
CTTTCAGGTCACCCACGTCTTCTCCAACATCAAGATGGGTGTCCGTTTTGTGTCTTTTGAACACTGGGGCCAGGACACAC
AGTTCTGGGCTGGCCACTATGGAGCCCGAGTGACCAATTCTAGTGTGATTGTGCAAGTCAGCCAGCCCTAG

Library Parental gene expression (RPM)
SRP017611_brain 2 .88 RPM
SRP017611_kidney 5 .13 RPM
SRP017611_liver 0 .96 RPM
SRP040447_lung 16 .22 RPM
SRP040447_skeletal_muscle 1 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000000656 within_species_paralog 1 retrogene
retro_cpor_1474,
Mustela putorius furo ENSMPUG00000017748 ortholog_one2one 3 retrogenes
retro_mputfur_1473, retro_mputfur_465, retro_mputfur_965,
Ictidomys tridecemlineatus ENSSTOG00000027765 ortholog_one2one 1 retrogene
retro_itri_401,
Tupaia belangeri ENSTBEG00000010522 ortholog_one2one 1 retrogene
retro_tbel_1067,
Tursiops truncatus ENSTTRG00000009850 ortholog_one2one 1 retrogene
retro_ttru_1161,
Vicugna pacos ENSVPAG00000004974 ortholog_one2one 1 retrogene
retro_vpac_470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1475 90.74 69.23
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Download FASTA sequences of all ENSCPOG00000004611 retrocopies