Parental gene:

MTHFD2L, ENSCJAG00000013883

Aliases:None
Description:Probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2 NAD-dependent methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate cyclohydrolase [Source:UniProtKB/Swiss-Prot;Acc:F6ZFR0]
Organism:Marmoset (Callithrix jacchus)
Coordinates:3:120432169..120595066(-)


>ENSCJAG00000013883
ATGACTGTGCCGGCCCGTGGCTTCTTGCTGCTCCGCGGCCGCCTGGGCCGAGTGCCGGCGCTGGGCAGGAGCACAGCACC
CCCCGTGAGAGCACCGGGAGGGCCCAGGAGCGCGTTCCGGGGCTTTCGGAGCAGCGGTGTGAGACATGAAGCCGTTATTA
TATCAGGAACCGAAATGGCTAAGCATATCCAGAAAGAAATAAAGCAAGGTGTGGAATCATGGATTTCCCTTGGAAACAGA
AGACCTCACCTCAGTATAATTTTAGTGGGAGATAATCCAGCAAGCCATACATACGTCAGGAATAAGATAAGAGCTGCCTC
TGCTGTAGGTATTTGTAGTGAGCTCATTCTAAAACCTAAGGATGTTTCTCAGGAAGAACTTTTGGACATAACAGATCAAT
TGAATATGGACCCAAGAGTCAGTGGTATATTAGTTCAGTTACCACTGCCAGACCATGTTGATGAACGAATGATATGCAAT
GGAATTGCCCCAGAAAAAGATGTTGATGGATTTCATATTATCAATATTGGAAGATTGTGCCTTGACCAGCATTCTCTCAT
ACCTGCCACTGCCAGTGCTGTTTGGGAAATAATAACAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTG
GAAGATCCAAGAACGTAGGGATGCCCATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCA
ACTGTGACAATAGCTCACAGATATACCCCCAAAGAACAGCTGAAGACTCATACACAACTGGCAGATGTTATCATAGTTGC
TGCAGGTATTCCAAAGTTGATTACATCTGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCAACTATGTCC
ATGATCCAGTGACAGGGAAGACAAAATTAGTTGGAGATGTGGACTTTGAAGCTGTTAAGAAGAAGGCTGGCTTTATAACT
CCAGTTCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACTCTTTTGGCAGCTAAAAAAATCATTTA
C

Library Parental gene expression (RPM)
SRP051959_colon 1 .80 RPM
SRP051959_heart 1 .28 RPM
SRP051959_kidney 1 .66 RPM
SRP051959_liver 28 .94 RPM
SRP051959_lung 4 .15 RPM
SRP051959_lymph_node 0 .39 RPM
SRP051959_skeletal_muscle 2 .29 RPM
SRP051959_spleen 1 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006627 ortholog_one2one 1 retrogene
retro_chof_2362,
Callithrix jacchus ENSCJAG00000017810 within_species_paralog 3 retrogenes
retro_cjac_2225, retro_cjac_2568, retro_cjac_3078,
Tupaia belangeri ENSTBEG00000009980 ortholog_one2one 4 retrogenes
retro_tbel_2436, retro_tbel_2590, retro_tbel_3051, retro_tbel_850,
Tursiops truncatus ENSTTRG00000002366 ortholog_one2one 1 retrogene
retro_ttru_397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1764 62.41 83.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000013883 retrocopies