Parental gene: | TEN1, ENSCJAG00000013878 |
| Aliases: | None |
| Description: | TEN1 CST complex subunit [Source:HGNC Symbol;Acc:37242] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:125229490..125259157(+) |
>ENSCJAG00000013878
ATGCTGCCCAAACCTGGGATCTTTTACCTCCCCTGGGAGATCAGTGCAGGCCAAGTTCCTGATGGCAGCACACTGAGGAC
ATTTGGCAGGTTGTGTCTCTACGACATGATCCAGTCTAGAGTGACGTTGACGGCTCAGCATGGATCCAATCAGCACCAGG
TTCTTGTCTGTACCAAGTTAGTGGAGCCCTTCCATGCCCAGGTGGGCTCCCTGTACATCGTCCTCGGGGAGCTCCAGCAC
CAGCAGGATGGAGGCTCCGTGGTGAAGGCGCGGGTGCTGACCTGTGTGGAAGGGATGAACCTGCCCTTGCTGGAACAAGC
CATCCGGGAGCAGAGGCTGTACCAGCAGGAGCGGGGCGGCGGCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 2 .04 RPM |
| SRP051959_heart | 2 .53 RPM |
| SRP051959_kidney | 3 .39 RPM |
| SRP051959_liver | 3 .18 RPM |
| SRP051959_lung | 2 .90 RPM |
| SRP051959_lymph_node | 2 .03 RPM |
| SRP051959_skeletal_muscle | 0 .96 RPM |
| SRP051959_spleen | 3 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000013858 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000029820 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001980 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008646 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_582 | 68.29 | 100.00 | Please wait, loading  |
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| 2. | retro_cjac_3524 | 71.54 | 100.00 | Please wait, loading |
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| 3. | retro_cjac_3525 | 69.92 | 100.00 | Please wait, loading |
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| 4. | retro_cjac_3554 | 71.43 | 90.98 | Please wait, loading |
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| 5. | retro_cjac_3890 | 67.48 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000013878 retrocopies