Parental gene:

ENSCJAG00000011407

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:140115333..140137493(-)


>ENSCJAG00000011407
ATGGAAGGCCCGGAGGGCGGCGGACGGGGACCCGTAGCGCGGGGCCCCGAGGGACGGCCGGCGCCCGAAGCCAGAGTGCA
CTTCCGAGTGGCGAGGTTCATCATGGAGGCAGGTGTCAAGCTGGGGATGCGGTCCATTCCCATTGCCACTGCTTGCACCA
TTTACCATAAGTTCTTCTGTGAGAGCAGCCTGGATGCCTATGACCCTTACTTGGTCGCCATGTCTTCCATTTACCTGGCT
GGCAAAGTGGAAGAGCAGCATCTGCGGACCCGTGATATCATCAATGTGTCCAACAGGTACCTTGACCCAAGCGGTGAGCC
CCTGGAGTTGGACTCCCGCTTCTGGGAGCTCCGAGACAGCATTGTGCAGTGCGAGCTTCTCGTGCTGAGAGTTCTGCGCT
TCCAGGTCTCCTTCCAGCATCCACACAAGTACCTGCTCCACTACCTGGTTTCCTTCAAGAACTGGCTGAACCGCCACAGC
TGGCAGCGGACTCCTGTTGCCGTCACTGCCTGGGCCCTGCTTCGGGACAGCTACCACGGGGGGCTGTGCCTCCGCTTCCA
GGCCCAGCACATAGCCGTGGCAGTGCTCTACCTGGCCCTGCAGGTCTATGGAGTCGAGGTACCTGCTGAGGTCGAGGCTG
AGAAGCCATGGTGGCAGGTATTTAGTGACGACCTTACCAAGCCAATCATTGATAATATTGTGTCTGATCTCATTCAGATT
TATGCCATGGACACAGAGATCCCCTAA

Library Parental gene expression (RPM)
SRP051959_colon 2 .40 RPM
SRP051959_heart 2 .39 RPM
SRP051959_kidney 2 .46 RPM
SRP051959_liver 2 .47 RPM
SRP051959_lung 2 .75 RPM
SRP051959_lymph_node 2 .97 RPM
SRP051959_skeletal_muscle 1 .48 RPM
SRP051959_spleen 2 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001388 within_species_paralog 1 retrogene
retro_cjac_780,
Callithrix jacchus ENSCJAG00000006738 other_paralog 1 retrogene
retro_cjac_1273,
Dipodomys ordii ENSDORG00000012846 ortholog_one2many 1 retrogene
retro_dord_420,
Gorilla gorilla ENSGGOG00000027073 ortholog_one2many 2 retrogenes
retro_ggor_2302, retro_ggor_911,
Macaca mulatta ENSMMUG00000011480 ortholog_one2many 1 retrogene
retro_mmul_557,
Nomascus leucogenys ENSNLEG00000013298 ortholog_one2many 2 retrogenes
retro_nleu_1493, retro_nleu_2416,
Otolemur garnettii ENSOGAG00000033279 possible_ortholog 1 retrogene
retro_ogar_70,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1814 89.32 94.35
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000011407 retrocopies