Parental gene:

ENSCJAG00000005282

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:7321857..7349695(-)


>ENSCJAG00000005282
ATGGGAGAGATTAAAGTCTCTCCTGATTATAACTGGTTTAGAGGTTCAGTTCCCCTTAAAAAGATTATCGTAGATGATGA
TGACAGTAAGATATGGTCGCTCTATGATGCGGGTCCCCGAAGTATCAGGTGTCCTCTGATATTCCTGCCTCCTGTCAGTG
GAACTGCAGATGTCTTTTTCCGGCAGATTTTGGCTCTGACTGGATGGGGTTACCGGGTTATCGCTTTGCAGTATCCAGTT
TATTGGGACCATCTCGAATTCTGTGATGGATTCAGAAAACTTTTAGACCATTTACAATTGGATAAAGTTCATCTTTTTGG
CGCTTCTTTGGGAGGCTTTTTGGCCCAGAAATTTGCTGAATACACTCACAAATCTCCGAGAGTCCATTCCCTCATCCTCT
GCAATTCCTTCAGTGACACCTCTATCTTCAACCAAACTTGGACTGCAAACAGCTTTTGGCTGATGCCAGCATTTATGCTC
AAAAAGATAGTTCTTGGAAACTTTTCATCTGGCCCAGTGGACCCTATGATGGCTGATGCCATTGATTTCATGGTAGACAG
GCTAGAAAGTTTGGGTCAGAGTGAACTGGCTTCAAGACTTACCTTGAACTGTCAAAATTCTTATGTGGAACCTCATAAAA
TTCGGGACATCCCTGTAACCATTATGGACGTGTTTGATCAGAGTGCACTTTCAACTGAAGCTAAAGAAGAAATGTACAAG
CTGTATCCTAATGCCCGAAGAGCTCACCTTAAAACAGGAGGCAATTTCCCATACCTGTGCAGAAGTGCAGAGGTGAATCT
TTATGTACAGATACATTTGCTGCAGTTCCATGGAACCAAATACGCGGCCATTGACCCATCAATGGTCAGTGCGGAGGAGC
TTGAGGTGCAGAAAGGCAGCCTTGGCATCAGCCAGGAAGAACAATAG

Library Parental gene expression (RPM)
SRP051959_colon 9 .74 RPM
SRP051959_heart 9 .49 RPM
SRP051959_kidney 16 .40 RPM
SRP051959_liver 16 .14 RPM
SRP051959_lung 12 .44 RPM
SRP051959_lymph_node 14 .68 RPM
SRP051959_skeletal_muscle 6 .40 RPM
SRP051959_spleen 15 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000013791 ortholog_one2many 1 retrogene
retro_meug_116,
Oryctolagus cuniculus ENSOCUG00000016136 ortholog_many2many 1 retrogene
retro_ocun_204,
Otolemur garnettii ENSOGAG00000010385 ortholog_one2many 1 retrogene
retro_ogar_3249,
Ictidomys tridecemlineatus ENSSTOG00000010101 ortholog_one2many 1 retrogene
retro_itri_1397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_67 100.00 100.00
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Download FASTA sequences of all ENSCJAG00000005282 retrocopies