Parental gene:

TPK1, ENSCHOG00000001227

Aliases:None
Description:thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:17358]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_7449:6174..49958(-)


>ENSCHOG00000001227
ATGGAGCATGTCTTTACCCCGTTGGAACTCCTGCTTCCCAGTGGGAATTTGAAGTACTGCCTTTTGATTCTGAACCAGCC
TTTGGACGACTGTTTTCGTCATCTTTGGAGCAAAGCTCTTTTAAAAGCCTGTGCTGATGGAGGTGCCAACCGCTTATATG
ATATCACTGAAGGAGAGCGGGAAAGCATTTTGCCTGAACTCATCAATGGAGATTTTGATTCTATTAGGACTGAGGTCAGA
AAGCACTACAGTATTAAGGGTTGTGAGCTGATTTCAACACCTGATCAAGATAACACTGACTTTACCAAGTGCCTCCAAGT
GCTGCAAAAGAAGATAGAAGAAAAAGCCCTACAGGTTGATATGATTGTGACACTGGGAGGACTTGGTGGACGTTTTGACC
AGATTATGGCATCTGTGAACACCCTGTTTCAAGCGATTGATATCACTCCCTTGCCAATTATAATAATTCAAGATAAATCT
CTCATCTACCTGCTCCAACCAGGAAAGCACAAGTTGCATGTCAACACTGGAATGGAAGGCGATTGGTGTGGCCTTATACC
TGTTGGGCAGCCTTGTAATCATGTTACCACAACAGGCCTAAAGTGGAACCTCANNAATCATGTGCTCGGTTTTGGAATCC
TGGTCAGTACTTTTAATACATATACATATGATGGGTCTGGGGTAGTGACTGTGGACACTGATCAGCCACTCCTCTGGACA
ATGGCCATCAAAGGCTAG

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018545 ortholog_one2one 4 retrogenes
retro_dnov_1080, retro_dnov_1592, retro_dnov_2405, retro_dnov_2523,
Macropus eugenii ENSMEUG00000010062 ortholog_one2one 1 retrogene
retro_meug_1153,
Myotis lucifugus ENSMLUG00000004213 ortholog_one2one 1 retrogene
retro_mluc_1071,
Monodelphis domestica ENSMODG00000025468 ortholog_one2many 2 retrogenes
retro_mdom_1299, retro_mdom_1300,
Ornithorhynchus anatinus ENSOANG00000020728 ortholog_one2one 1 retrogene
retro_oana_44,
Vicugna pacos ENSVPAG00000010214 ortholog_one2one 2 retrogenes
retro_vpac_205, retro_vpac_503,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_191 65.12 51.84
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2. retro_chof_468 73.47 99.59
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3. retro_chof_472 76.79 68.16
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4. retro_chof_550 78.39 95.92
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5. retro_chof_630 77.37 75.92
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6. retro_chof_665 81.82 62.45
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7. retro_chof_701 72.87 99.59
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8. retro_chof_801 80.98 74.69
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9. retro_chof_917 72.98 100.00
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10. retro_chof_954 65.62 64.08
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11. retro_chof_988 79.83 95.10
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12. retro_chof_1004 73.72 63.27
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13. retro_chof_1093 76.56 52.24
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14. retro_chof_1416 65.52 57.96
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15. retro_chof_1458 77.23 82.45
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16. retro_chof_1537 72.68 82.45
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17. retro_chof_1683 65.62 64.08
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18. retro_chof_1732 80.39 82.04
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19. retro_chof_1927 78.17 79.59
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20. retro_chof_2202 77.84 78.37
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21. retro_chof_2413 81.82 62.45
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22. retro_chof_2507 80.00 99.59
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23. retro_chof_2577 80.00 56.73
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Download FASTA sequences of all ENSCHOG00000001227 retrocopies