Parental gene:

PPIB, ENSCAFG00000017053

Aliases:None
Description:peptidylprolyl isomerase B (cyclophilin B) [Source:HGNC Symbol;Acc:9255]
Organism:Dog (Canis familiaris)
Coordinates:30:28437471..28660068(-)


>ENSCAFG00000017053
ATGCTGCGCCTCTCCGAGCGGAACATGAAGGTTCTCTTCGCCGCCGCCCTCGTCGTGGGCTCCGTCTTCTTCTTGCTGTT
GCCAGGCCCCTCCACGGCCGACGAGAAGAAGAAGGGGCCCAAAGTCACCGTCAAGGTGTACTTCGACCTTCGAATTGGAG
ATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCC
ACCGGGGAGAAAGGATTTGGCTACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGACTT
TACCCGAGGAGATGGCACTGGAGGAAAGAGCATCTATGGTGAACGCTTCCCTGATGAGAACTTCAAGCTGAAACACTATG
GGCCTGGCTGGGTGAGCATGGCCAATGCAGGCAAAGACACCAACGGCTCCCAGTTCTTTATCACGACGGTTAAGACTGCC
TGGCTAGATGGCAAGCACGTGGTGTTCGGCAAAGTTTTGGAAGGCATGGAGGTAGTACGGAAGGTGGAGAGCACAAAAAC
AGACAGCCGGGACAAGCCCCTGAAGGATGTGACGATCGCAGACTGTGGCAAGATTGAGGTGGAGAAGCCCTTCGCCATCG
CCAAGGAGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 145 .36 RPM
SRP017611_brain 71 .37 RPM
SRP017611_kidney 183 .52 RPM
SRP017611_liver 96 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032245 other_paralog 1 retrogene
retro_cfam_180,
Equus caballus ENSECAG00000017164 ortholog_one2one 1 retrogene
retro_ecab_617,
Echinops telfairi ENSETEG00000012671 ortholog_one2one 1 retrogene
retro_etel_1493,
Loxodonta africana ENSLAFG00000018698 ortholog_one2one 1 retrogene
retro_lafr_521,
Oryctolagus cuniculus ENSOCUG00000012012 ortholog_one2one 1 retrogene
retro_ocun_413,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1999 87.42 72.69
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Download FASTA sequences of all ENSCAFG00000017053 retrocopies