Parental gene: | ENSCAFG00000005131 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 20:8103993..8131982(-) |
>ENSCAFG00000005131
AGCCCAGGCCCCCTCTTTCCCTCGCAGGTGCCCATGGCGTCGGAGCGGCGCAAGGTCAAGTACCACTGGAGCGGCGCCTC
GGAAGGCTGTCCCCGCAAGCGCAGCTGCCTCCGGGAGCCCCGTGATGTGGCCCCCTCCAGCCGGCCGGCTCCGAGCTCTG
CGTCGCGGGCCGGAGGGACCAGCAGCCCCAAGCGCCTGAGAGCCCAGAAGGAGGACGATGTGGCCTGCACGCCGAGGTTG
CCCTGGGGCTCGTCCTGCCGCAGAAATTCCTCCTCCTCCTCCTCGTCCTCCTCGCATTCCTCCGGCCCAGGTGTGGGCGG
GGCTGCCGCCCGAGGCTGCCTGATTCGGAGTACCCGGGGATTCCTGTCGTCTGGGGGATCCCCTCTTCGCCCTGCCAGCC
CCTCTCCACAAGAAATGGCTTCTCTAGAGGAGGAAGCCTGCAGCCTTAAGGTTGATTCAAAAGATAGTTCCCGTAACTCC
ATGAACTCTGAATTTGCAGCTGAAGCAGAGGGTCAGAATGATACAAATGAGGAGCCAAACAAGGTGCAGAAAAGGAAGAG
AGATAGATTTCGAGACCAAGGCTCTACAGTCATTTACCTAAAGGCTATCCAGGGCATCCTGGGGAAGTCAATGCCAAAAA
GGAAGGGAGAGGCTGCCACGAGGGCAACAACAAGCACAGGAGAGCGTCCCATCCGTGGAGAAGGGCCAGGCAGGAGTGTC
ACCGTATCTCCTCAGAAGGGGAAAGAGTCAGCCCCAGAGGTGAGAGCTGAGGACGAAAAGGCTGTGCCTGAGAGGAGCAG
CTTCTGTGACAGGAGAGTGGTAATAGACCCTCAGGAGAAGCCTAGTGAGGAGACACCTGGTGACCGAAGGACAGTCATTG
ACAAGCCCTCTCCAGCCCTGGAGTTTCTGGATGACTCTGACTCTCATTTAGAAAGCCACAAGCCTAAAGAAAGGGAGGTG
GTTATAGAGCACACCTCTTCAGGAAGTGACTGGTCTGACGTGGATGAGGTCTCCACAGTCAGATTCTCTCAGGAGGAGCC
CAGCTCGCTGAAACTCTCCACAGTTCCAGAGCCTTCTGCCTTCCCCACTGACTATGTCATGTACCCGGCTCATTTGTACA
GTAGTCCATGGTGTGACTATGCCAGTTATTGGACCAGCAGCCCCAAGCCTTCTGGTTATCCCTCCATGGGCAGCAGCAGC
GACCCACTGCAGGCAGGGAGGAGCAGCCGGGGCCTCCTGAGTGATTATTCCCCTAACTCTAGAGTGAGCTCCCAGAACAC
CTCTAGAGACCAGGATGTGACAGAGGAAGGCAGATCCCAGAACACTCGTTCATTTCGTTTCTCCAGAAGCTCAGAAGAAG
AGGTGAAGGAAAAAAGAGCACTCCAGGAGGAGGCGGTACCTCGCTCCTGTGGAGGACTTGCATCTAGCTCCCTGCCAAGG
AACCATCGGGAGTCAGGCCTCGAGGAGGGTTTCATTGATACCCACTGTCACTTGGACATGCTGTATTCCAAGTTGTCTTT
CAAAGGGTCCTTTACCAAGTTCAGAAAAATTTATAGCAGCTCCTTCCCGAAGGAATTTCAGGGCTGCATCTCTGACTTCT
GTGATCCTCGGACACTGACAGATTGCCTGTGGGAGGAGCTGTTGAAAGAGGATCTGGTCTGGGGGGCCTTTGGCTGTCAT
CCTCATTTTGCACGTTACTACAGTGAGAGTCAAGAAAGAAATCTTTTGCAAGCACTAAGGCACCCCAAGGCTGTGGCATT
TGGGGAAATGGGCTTGGATTACTCGTATAAGTGCACTACGCCTGTCCCAGAACAGCACAAGGTGTTCGAGAGACAGCTAC
AGCTGGCTGTGTCTCTGAAGAAGCCCTTGGTGATCCACTGCCGAGAAGCTGACGAAGATTTGCTGAACATCATGAAAAAA
TTTGTGCCCTCAGACTACAAGATCCATAGGCACTGCTTCACCGGCAGCTACCCAGTCATCGAGCCCCTGCTGAAGCACTT
CCCCAACATGTCTGTGGGCTTCACTGCAGTCTTGACTTACTCCTCGGCCTGGGAGGCCCGGGAAGCTCTGAAGCAGATCC
CGCTGGAGAGAATCATTGTGGAAACGGATGCTCCCTACTTCCTGCCCCGACAGGTTCCCAAAAGCCTCTGCCAATATGCT
CACCCAGGCCTGGCCTTGCATACAGTTCGAGAGATTGCGAGGGTCAAAGATCAGCCTCTCTCCCACACCTTGGCCACCCT
GCGTGAGAACACCAGCCGCCTCTACAATCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 39 .18 RPM |
| SRP017611_brain | 53 .59 RPM |
| SRP017611_kidney | 11 .62 RPM |
| SRP017611_liver | 10 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016012 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000010589 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017160 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_2059 | 61.08 | 82.69 | Please wait, loading  |
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Download FASTA sequences of all ENSCAFG00000005131 retrocopies