Parental gene:

SNX7, ENSBTAG00000031461

Aliases:None
Description:sorting nexin-7 [Source:RefSeq peptide;Acc:NP_001157409]
Organism:Cow (Bos taurus)
Coordinates:3:44657521..44775833(-)


>ENSBTAG00000031461
ATGGAGGGCGAGTGCCGGGCGTCTCAGGCGCGCTCCTGGGGCCTCCCGGCTGGGGGCGCCGGCGGGGACAGCCCGGGGGG
TGACGCCCCCCTCCCCGGCAGCATCAGCTCCTCCTCCCTGCTGCAGGCCGAGGTGCTGGATCTGGACGAGGACGAGGACG
ACCTGGAGGTGTTCAGTAAGGATGCCTCATTGATGGACATGAATTCCTTTAGCCCTCTGATGCCGACGTCCCCTTTATCA
ATGATAAACCAAGTCAAGTTTGAAGATGAGCCAGATTTGAAAGATCTTTTTATTACAGTGGATGAACCTGAAAGCCATGT
TACTACAATTGAAACGTTTATTACTTATAGGATTATTACTAAGACATCTCGTGGGGAATTTGACTCCAGTGAATTTGAAG
TTAGGAGACGTTATCAAGATTTCCTTTGGTTGAAAGAAAAACTTGAAGAAGCTCACCCCACTCTGATTATTCCACCATTG
CCAGAAAAGTTTATAGTGAAAGGAATGGTGGAACGCTTTAATGATGACTTCATTGAGACACGAAGGAAGGCATTGCACAA
ATTTTTGAACCGAATTGCTGACCATCCAACTCTAACATTTAATGAAGACTTTAAAATTTTTCTTACTGCACAAGCTTCGG
AATTCTCTTCTCACAAGAAGCAAGGGCCTGGATTACTCAGCAGGATGGGACAGTCAGTCAGAGCGGTTGCATTGTCAATG
AGAGGAGTTAAAAGTCGCCCTGAGGAGTTCATGGAAATGAATAACTTCATTGAAATATTTAGCCAGAAAATAAATTTGAT
AGATAAAATATCTCAGAGAATCTACAAGGAAGAACGGGAATATTTAGATGAAATGAAAGAATATGGCCCAATTCATATTC
TGTGGTCAGCATCGGAAGAAGATCTGGCTGATACTCTGAAAAGTGTTGCCAGCTGCATTGACAAATGCTGTAAGGCCACT
GAAAAACGGATGTCTGGATTCTCAGAGGCCCTGCTTCCTGTTGTACATGAGTATGTGCTTTATAGTGAAATGTTAATGGC
TGTCATGAAAAGAAGAGACCAAATACAGGCAGAACTGGATTCCAAAGTTGAAGCTTTGACGTCCAAAAAGGCAGATACTG
ATCTGCTTACAGAAGAGATTGGAAAACTGGAAGATAAAGTGGAGTGCGCTAATAATGCCCTGAAAGCAGATTGGGAAAGA
TGGAAACAAAACATGCAAAATGATATCAAGTCAGCATTTACAAATATGGCTGAGGAAAACATCCTGTATTATGAACAGTG
CCTTGCTACATGGGAATCCTTCCTTACATCACAGACAGATCTCCACCTGGAAGAAGCCTCTGAAGATAAATTGTAA

Library Parental gene expression (RPM)
ERP005899_liver 22 .13 RPM
ERP005899_muscle 8 .60 RPM
SRP017611_brain 1 .69 RPM
SRP017611_kidney 11 .20 RPM
SRP017611_liver 11 .40 RPM
SRP030211_testis 1 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008131 ortholog_one2one 2 retrogenes
retro_chof_1097, retro_chof_1388,
Gorilla gorilla ENSGGOG00000023577 ortholog_one2one 1 retrogene
retro_ggor_744,
Macropus eugenii ENSMEUG00000011320 ortholog_one2one 1 retrogene
retro_meug_1016,
Sarcophilus harrisii ENSSHAG00000002487 ortholog_one2one 1 retrogene
retro_shar_420,
Tupaia belangeri ENSTBEG00000000168 ortholog_one2one 1 retrogene
retro_tbel_2595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_453 89.86 76.27
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Download FASTA sequences of all ENSBTAG00000031461 retrocopies