Parental gene: | RPL36A, ENSBTAG00000019253 |
| Aliases: | None |
| Description: | 60S ribosomal protein L36a [Source:UniProtKB/Swiss-Prot;Acc:Q3SZ59] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | X:55209957..55213506(+) |
>ENSBTAG00000019253
GCTTGCGCCTGCAGCTCTGAGTTGAGTCCTCTCAGACGCCAGAGGGAGTACATGGGGCTAGACCACCTTATAGTGAACGT
TCCAAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGGAAGCACCAGCCCCACAAAGTGACACAGTACAAGAAGGGCAAGG
ATTCTCTGTATGCCCAGGGAAAGCGGCGTTATGACAGGAAACAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGG
AAAAAGGCTAAAACTACAAAGAAGATTGTACTGAGGCTTGAATGTGTTGAGCCCAACTGTAGATCAAAGAGAATGCTGGC
TATTAAGAGATGCAAGCATTTTGAGCTGGGAGGTGATAAGAAGAGAAAGGGCCAAGTGATCCAGTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 63 .88 RPM |
| ERP005899_muscle | 213 .64 RPM |
| SRP017611_brain | 20 .51 RPM |
| SRP017611_kidney | 45 .22 RPM |
| SRP017611_liver | 21 .82 RPM |
| SRP030211_testis | 16 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000008503 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017385 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025578 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000013479 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_92 | 100.00 | 100.00 | Please wait, loading  |
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| 2. | retro_btau_183 | 100.00 | 100.00 | Please wait, loading |
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| 3. | retro_btau_241 | 94.23 | 98.11 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000019253 retrocopies